| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0124 |
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| Symbol | |
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| ID | 4597573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 137752 |
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| End bp | 139167 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639774734 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_921356 |
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| Protein GI | 119714391 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.55159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCGGAC CCGATGGCGT CCGGCTCGGT ACGGCGACCG GCCGCGCCGT CGTCCTCGCG
GCGGTCCTCG GCTCGGGGAT GACGATGCTC GACGGCACCG TCGTGAACGT CGCGCTGCGC
ACGATCGGCG CGGACCTGGA CGCCTCGCTC CCCGAGCTGC AGTGGATCAC CAACGGCTAC
CTGCTCTCGA TGGCCAGCCT GATCCTGCTG GGCGGGTCGC TGGGCGACCG GTTCGGCCGG
CGCCGGGTGT TCGTGGTGGG CACGGTGTGG TTCGCCGTCG CCTCGCTCGC GTGCGGCTCG
GCGCCGACGC CGGAGGTCCT GATCGTCGCG CGGATCCTCC AGGGCGTCGG CGCGGCCCTG
CTCACGCCGG GCAGCCTCGC GATGATCCAG GGTGCCTTCG TCCGCGACGA CCGGGCCCAG
GCGATCGGCT CCTGGTCCGG GTTGACGAGC ATCGCGGCCG CCGTCGGGCC GCTCGTCGGC
GGCGCACTGG TGCAGTACGC CAGCTGGCGC TGGATCTTCC TGGTCAACCT GCCGATCGCG
ACGCTCACCG TCGTCGTCGC CCGCCGCGCG GTCCCGGAGA CGCGGGACCC GAACGCCCCC
CGGCGCTTCG ACGCCCTCGG CGCGGTGCTG GCCGCGCTCG CCCTCGGCGG CCTGACCTAC
GCGCTGATCG AGTGGGGTGG CGCCCTCGCG CCCTGGGCCG TGGTCGTCAC CGTCCTCGCG
GCTGCGGCGT ACCTCGTCGA CGAGCGCCGC AGCGACCACC CGATGCTGCC GCTCGGCATC
TTCGCCGACC GCACCTTCAC CGCCGCCAAC GCGATGACGA TGGTCGTCTA CGCCGCGCTC
GGTGCCGTGT TGTTCTTCCT CGTCCTGCAG CTGCAGACGG TGAGCGGGTA CGGCGCGCTC
GGCGCCGGCC TGGCCACTCT GCCGATCACG TTCTGCATGC TGCTGCTCGC CTCGCAGGGC
GGCCGGCTGG GCGCCCGGAT CGGCCCTCGC GTCCCGATGA GCCTCGGCCC GCTGGTGATG
GCCGCGGGCA CCCTGCTGCT GCTGCGCGTC GGCGCCGGGA CGACGTACTG GACCGACGTG
CTGCCCGGGC TGGTCGTCTT CGGGCTGGGG CTGGCACTGC TGGTCGCGCC GCTGACCGCC
ACCGTCCTGG CCGCCGTGGC CGACGAGCAC GCCGGGATCG CCAGCGGCGT CAACAACGCG
GTCGCCCGCG CCGGCTCGCT GCTGGCGGTG GCCGCGCTCC CGGCCGCGGT CGGGCTGCGC
GGCGAGGAGT ACGCCGACCC GGTGGCGTTC GACGCCGCCT ACGGCTCGGC GATCCTCGCG
TGCGCCGCGC TGCTCGCGCT GGGCGGCGTC GTCTCGTGGC TGAGCATCCG CGACCCGGGC
ATCGGCCGGA CCGCCGCGCC ACCGATCGGA AGGTAG
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| Protein sequence | MAGPDGVRLG TATGRAVVLA AVLGSGMTML DGTVVNVALR TIGADLDASL PELQWITNGY
LLSMASLILL GGSLGDRFGR RRVFVVGTVW FAVASLACGS APTPEVLIVA RILQGVGAAL
LTPGSLAMIQ GAFVRDDRAQ AIGSWSGLTS IAAAVGPLVG GALVQYASWR WIFLVNLPIA
TLTVVVARRA VPETRDPNAP RRFDALGAVL AALALGGLTY ALIEWGGALA PWAVVVTVLA
AAAYLVDERR SDHPMLPLGI FADRTFTAAN AMTMVVYAAL GAVLFFLVLQ LQTVSGYGAL
GAGLATLPIT FCMLLLASQG GRLGARIGPR VPMSLGPLVM AAGTLLLLRV GAGTTYWTDV
LPGLVVFGLG LALLVAPLTA TVLAAVADEH AGIASGVNNA VARAGSLLAV AALPAAVGLR
GEEYADPVAF DAAYGSAILA CAALLALGGV VSWLSIRDPG IGRTAAPPIG R
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