Gene Noca_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0117 
Symbol 
ID4597566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp130799 
End bp131413 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content72% 
IMG OID639774727 
ProductPadR family transcriptional regulator 
Protein accessionYP_921349 
Protein GI119714384 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.219562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTTGC TGGGTGCGGT GGCGCTCTTC GAGCCGGTCA ACGGCTACCA GATCCGCCGG 
GAGCTGCTGT CCTGGCAGGT GGACCGGTGG GCGCACACCA ACCCGGGCTC GATCTACCAC 
GGCCTGACGT CGCTGACCGG GCTCGGCCAC CTGGTCCGCC ACGACCTCGT GGACGGGGGC 
CGCGAGGTCG CGGTCTACGA GCTGACCGGG AGCGGCCGGG CCGAGCTGGA GCGACTGATG 
GTCGAGGCGC TGGAGACCGT CAACCCCTAT GAGCGCAGCG CGTTCACGGT CGCGTTCTCG 
ATGCTGCCGC TCCTCGACCG CGACCGGGTG CTGCGGAGCC TGACCCGGCG GCGCGTGGAC 
CTGGAGCAGA CGGTGGCCGA GCTCGCGGCA GCGAACCCGG GCGTCGCCCC GCCGCACGCG 
ACCCGGAGCA TGCTGCTCTG GCTCGACCTC GCGGTCGCCG AGCTCGCGTG GCTGCGCGAG 
ACCATCGAGG ACATCCGCGC GGGCAAGCTG CCCTTCGAGA TGGACGACGA CTGGGGCTGG 
ACCCCGCCCG CCGACGACCC GGGCTGGCAG ATGAGCACCG ACCGGGAGAA GTACCGCGCG 
CTACTCGGTC GCTGA
 
Protein sequence
MLLLGAVALF EPVNGYQIRR ELLSWQVDRW AHTNPGSIYH GLTSLTGLGH LVRHDLVDGG 
REVAVYELTG SGRAELERLM VEALETVNPY ERSAFTVAFS MLPLLDRDRV LRSLTRRRVD 
LEQTVAELAA ANPGVAPPHA TRSMLLWLDL AVAELAWLRE TIEDIRAGKL PFEMDDDWGW 
TPPADDPGWQ MSTDREKYRA LLGR