| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0108 |
|---|
| Symbol | |
|---|
| ID | 4600081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 120754 |
|---|
| End bp | 121770 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 639774718 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_921340 |
|---|
| Protein GI | 119714375 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.476377 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGTCG CCGCCCGGCT CCACTCCGTC GGCGACCTGC GGGTCGAGCA GGTCGCCGAG
CCGCCCGCTC CCACCGTCGG CTGGTCGACC GTCGCGGTCA CCTCGGTCGG GCTCTGCGGC
TCCGACCTGC ACTGGTTCAC CGACGGCGGC ACCGGCGAGG TCACGCTCGA CCGACCGGTG
GTCCCGGGCC ACGAGCTCGC CGGGCGCGCA CTGGACGGGC CGTACGCCGG GCGCCGGGTC
GCGATCGACC CCGCGATCCC GTGCGGGGTC TGCGAGCAGT GCCGCGCCGG GCACGGGAAC
CTGTGTCCCG ACGTGCGCTT CGCCGGGCAC GCCGGCCTGG ACGGCGGCCT CCAGGAGCGG
CTGGTCTGGC CCGACCACCT GCTGTTCCCG CTCCCGGACG ACCTCAGCGA CGATGCGGGC
GCGCTGCTCG AGCCGCTCGG GGTCGCGATC CACGCGGTCG GGGTGGCGCA CGTCCGCCCC
GGCCACGACG TACTGGTGGT GGGCGGCGGC CCGATCGGGG TGCTCACTGC CGCGGTGGCT
CGCCGTACCG GCGCCGCCCA GGTGGTCGTG AGCGAGCCGC TCGCGCACCG GCGCGAGACC
GCACGCCGCT TCGGCGCCGA CGTCGCGGTC GCACCGGAGG AGGCCTCGTC CGCGGTCGAC
GAGCTGACCG GCGGGCGCGG CGTCGACGTG GTCATCGAGA TGGCGGGGGC GGACGACGCC
ATCGGCACCG CCGTCGCCTG CGCGCGCCCG GGCGCCCGGA TCGCGCTGGG CGGCATCCCG
TCGGTGCCGC TGTCCTCGTT CCCCGCCGCA CCCGCCCGGC GCAAGGGCCT GACCTTCGCG
ATGGTCCGCC GGATGCACGA GACCTACCCG CGCGCGATCG AGCTCGCCAC GAGCGGCATC
GACCTCGACG CCCTGGTCAG CGACCGCTTC CCGCTCGCCG ACGCACCCCT CGCCTTCACC
CACGCCGTCG CCCGCACCGG CGACAAGACC GTCATCGCGG TGTCCGGCAC CCGTTGA
|
|---|
| Protein sequence | MPVAARLHSV GDLRVEQVAE PPAPTVGWST VAVTSVGLCG SDLHWFTDGG TGEVTLDRPV
VPGHELAGRA LDGPYAGRRV AIDPAIPCGV CEQCRAGHGN LCPDVRFAGH AGLDGGLQER
LVWPDHLLFP LPDDLSDDAG ALLEPLGVAI HAVGVAHVRP GHDVLVVGGG PIGVLTAAVA
RRTGAAQVVV SEPLAHRRET ARRFGADVAV APEEASSAVD ELTGGRGVDV VIEMAGADDA
IGTAVACARP GARIALGGIP SVPLSSFPAA PARRKGLTFA MVRRMHETYP RAIELATSGI
DLDALVSDRF PLADAPLAFT HAVARTGDKT VIAVSGTR
|
|---|
| |