| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1812 |
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| Symbol | |
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| ID | 4602049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1753782 |
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| End bp | 1755635 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639774585 |
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| Product | DEAD_2 domain-containing protein |
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| Protein accession | YP_921210 |
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| Protein GI | 119720715 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | [TIGR00604] DNA repair helicase (rad3) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0429091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTTACCG GCAGGTACGC GTTTCCCTAC AAGCCCAGGA GGCACCAGCT GGAGGTTGCC
GAGAAGATCG TAGAGCTGTT GAAACGCGGG AACGTCGTGC TGGAGGCGCC TACGGGCTTC
GGCAAGACAC CGGTCGTCAT CTACGCCCTT CTACCATTCA TGGAGCGCGG GGGGAGGGTC
GTATGGGCGG TGAGGACGGG TAGCGAGACC GACAGGCCGG TCGAGGAGTT CAGGGTCTTC
AGGGAGAAGT CGGGCGCGAG GTTCGTCGCA GTCGGGTTGC GCGGGAAGAA GGACATGTGC
CTGCTGGCCG GGGAGAGGGG CGGGCAACTC GACTACAGCG AGGTATCGTA CATATGTAGC
CGCGAAAGGA GGAGGTGCAA GTACTACAGG AGGCTGCAGG AAGGCGTGGA CTACTCCGAG
CTCCTTGAGA GGGGCGCCCT AACTTACAGG GATGTGTTCG AGTGGGCGAG AAGAGAGGGG
GTCTGCCCGT ACTTCCTCCA GCGGGAGTTG CTCAAAGTCG CGGACCTCGT CGCCCTGAGC
TACAACTACG TCGTGGACGA AGATCTCTCG TGGACCCTTA GAGGAGCTTT CCCGACTAGC
CAGTCCATAC TCGTAGTCGA CGAGGCGCAC AACCTCCAAG AACTCAACCT CGGCGGAGAC
ACCGTGACGG AGGGGACTAT CGCGAGGGCC AAGGAGGAAG CCGCCGAGAT GGGGGACGAA
GAGGTGTACG GGTTCGTGGA GGCGCTCGAG GCGAAGGTTA GGGAGAAGTA CGGCTCCCTA
CCGGAGGAGG GGTCCGAGGT CTTCCGTGCG GAGGACCTCC TCGACGGCTT CGACGAAGAC
ATCATCGAAA AGACTCTGCG GCTCGGCGAA CTTGTCAGGG AGAAGAGGTA CAGGAGCGGC
GCGAGGCCCC GCAGTAGCGC CCACCACTTG GCGGAATTCC TCCGGAAGGC CGTCGACCTC
GAAGGCGTGA AGGGCATAGC GCTCATAGCC GAGAAGGTCG ACGGCAGAGT CCACCTCAAT
ATATGGGACA TGAGGTCCGG GGAGATACTC TCGGGCGTCT GGAGGAGGTT TAGAAGGGTG
ATCTTCATGT CCGGGACTCT CTCGCCGATC GAAGCCTTCG CCGAGACTGT GGGGTTAAGC
GACTACACCC CGGTAACCGT TCCGAGCCCC TACGACGAGA CAAACGCCTC TGTCTACCTC
GTAAAGGACC TGACGACGCG GGGTGAGGAG CTCTCCGAGG AGATGGCCGA GAGGTACGTC
TCGGCTGTCG GCAGGGTTTT AGGCAGGGTT AAGAGGAACA GCGCCGTGTT CACTGCTAGC
TACAGGGTTC TGCAGAGGCT TCTCGAGGCT GGCTTAAAGG AGGAGGCCGA AAGGCTCGGC
TACGAGGTTG TCGTTGAGCG GAGGGATATG TCCGGGCAGG AGGCAGGCGC AGCTCTCGAG
AAGTTCAAAA ACCTCGCCGC GGAGGGGAGG GGGCTCCTCC TGGCCCCGAT GGGAGGCAGG
TTCGCAGAGG GCGCGGACTT CCCGGGAGAG GAGCTAATGT GCGTCTTCCT GGCGGGTATC
CCGTTCGAGA AGCCTACGAC GAAGACAAAC CTATACATAA AGTACTACGA GGAGCTCTAC
GGCCCCGAGA AGGGGAGGCT TTACGCGTAC GTGTACCCAG CCCTGAGGAG GGCTAGCCAG
GCTATCGGGA GGGCGTTGAG AAGCCCGAGG GACCAAGCGG TCATAGTTCT AGGCGATTCA
AGGTATAGGA ACTACATGGG GTTGCTTCCG GACTACGTGC GGGAGCTCGC GGTGGAGGTA
AAGTCGCAGG ATCTCGACTC TGTTGAACCT CCATGGGAAA AGATAAAGCT TTGA
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| Protein sequence | MVTGRYAFPY KPRRHQLEVA EKIVELLKRG NVVLEAPTGF GKTPVVIYAL LPFMERGGRV
VWAVRTGSET DRPVEEFRVF REKSGARFVA VGLRGKKDMC LLAGERGGQL DYSEVSYICS
RERRRCKYYR RLQEGVDYSE LLERGALTYR DVFEWARREG VCPYFLQREL LKVADLVALS
YNYVVDEDLS WTLRGAFPTS QSILVVDEAH NLQELNLGGD TVTEGTIARA KEEAAEMGDE
EVYGFVEALE AKVREKYGSL PEEGSEVFRA EDLLDGFDED IIEKTLRLGE LVREKRYRSG
ARPRSSAHHL AEFLRKAVDL EGVKGIALIA EKVDGRVHLN IWDMRSGEIL SGVWRRFRRV
IFMSGTLSPI EAFAETVGLS DYTPVTVPSP YDETNASVYL VKDLTTRGEE LSEEMAERYV
SAVGRVLGRV KRNSAVFTAS YRVLQRLLEA GLKEEAERLG YEVVVERRDM SGQEAGAALE
KFKNLAAEGR GLLLAPMGGR FAEGADFPGE ELMCVFLAGI PFEKPTTKTN LYIKYYEELY
GPEKGRLYAY VYPALRRASQ AIGRALRSPR DQAVIVLGDS RYRNYMGLLP DYVRELAVEV
KSQDLDSVEP PWEKIKL
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