| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1772 |
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| Symbol | |
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| ID | 4601949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1714395 |
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| End bp | 1715504 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639774545 |
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| Product | THUMP domain-containing protein |
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| Protein accession | YP_921170 |
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| Protein GI | 119720675 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1818] Predicted RNA-binding protein, contains THUMP domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.375193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGGTA GCGCTTTGAT CATAACGTGT AAGCTCGGCT TCGAGAGGGT AGTAGCGTCC
TACGTAGAGG AGCTCGACCC GGCGGCGGAG GTTGAGGCTA CGCCGCAAGG CTTCGCCGGG
CTTGTACTGG TTCGGCCGGG CAACCTTAAA GCCGAGGAGC TCGCACGCGC GGTTAAAGAG
AGGGTTCCGG AAGCCGAGAA GGTGTTCGTC GCGGACGCTG AGTGCAACGC GAGCATAGAG
GAGATAGTCA GGTGCGCGGT GGGGATAAGC GCCGGGATAA GCCGGGAGGA GAGCTTCGCC
GTTAGGACTG TGAGGAGGGG TAGCCACGGC TTTACAAGCC TAGACGTGAA CGTAGCCGTG
GGTTCAGCAG TGAAGGAAGC AACGGGGGCC AGGGTCGACC TGGAGAACCC CGACAAGGTA
ATCTTCGTGC AGATACTGCA GGACAAAGCT TACCTGTCCC TGGTCCCGGG CTCCGAGTTC
TACAAGAAGA TGCCCTCCTC GAAGTACCCC GTGTACAAGG TCTTCAGAAA GCTCGTCGTG
GCACACGAGC CGTACCTCGG TCCTCCGGAC GCGTCGTACG TCATGGGTAC CCGTATCGGC
AGGGAGGTCC AGGTGTTCGA GGTCGGAAAG CTGTACGTAA CGCCCGTGGG GGCGGTTGAC
GCGTACTCCC TCTACAGCTT CCTGAGGGGC GCCTTCGAGG GGCAGAGGTC CCGGTTCGAG
TTGCAGAAGA GGAGCTACGG GAGGGAGGTC GTCAAGACGG AGGTGTACGT GCAGGACATG
TACCAGTTCG CGAGGTCCAG GCTCGGGAAG CCGCTCATAA TATTCGAGCC CGAGGGGGAG
CCCGTGTCCA GGGTGGCCGG GGAGGTCGCG GACTTCATAA TAAGGAAGGT CTTCAAGGAG
AAAGAGGAGG TAGCGATAAT GGTTGGGGCT AGAGAAGGCG TGCCGACGGG GCTTTTCCGG
TTTGCGGACT TCGTTCTCGA CGTGGCCCCC GGGGTGGTTA TCTCGACGGA GTACGCCCTT
TCCTCCGGGC TGATAGCGCT CGCCACGATA CTTCACGAGA AGCTCGTAGA GGCGGCGTCC
AGCGGGGAGC TAGGCGCGGG CGAGCCTTAG
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| Protein sequence | MGGSALIITC KLGFERVVAS YVEELDPAAE VEATPQGFAG LVLVRPGNLK AEELARAVKE
RVPEAEKVFV ADAECNASIE EIVRCAVGIS AGISREESFA VRTVRRGSHG FTSLDVNVAV
GSAVKEATGA RVDLENPDKV IFVQILQDKA YLSLVPGSEF YKKMPSSKYP VYKVFRKLVV
AHEPYLGPPD ASYVMGTRIG REVQVFEVGK LYVTPVGAVD AYSLYSFLRG AFEGQRSRFE
LQKRSYGREV VKTEVYVQDM YQFARSRLGK PLIIFEPEGE PVSRVAGEVA DFIIRKVFKE
KEEVAIMVGA REGVPTGLFR FADFVLDVAP GVVISTEYAL SSGLIALATI LHEKLVEAAS
SGELGAGEP
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