| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1770 |
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| Symbol | |
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| ID | 4601947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1710170 |
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| End bp | 1710874 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639774543 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_921168 |
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| Protein GI | 119720673 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0933094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCAGCG CAGTAATAAC GGGCGCGTCC TCCGGGATAG GCAGGGAGCT ATCGGCAGAG
GCCTGCAGGC GGGGTTACAG GGTCCTCGGG ATCGGGCGGA ACGAGGCGGC ACTGAGGGAG
CTAGCCTCCG AGCACCCGGA CTGCTTCGCG TACCTCGTCC TAGACCTCTC GGACCCGGCT
AGCGCCGAGC GGGTAGCAGA GTTCGTCTCC AGCGAGTTCC GTAGCCTCAG CCTGCTCGTT
AACAACGCGG GGTACGGGGT CGGCAGGGGG ATTCTCGAGA TGACGCCGAG GGAGATCCTC
GACACGGTAA ACGTGAACTT CGCAGCCCCG CTCCTCCTAA CCAAGCTACT TCTACCCTAC
ATGGAGAGGA GCGGCACCGT GGTGAACGTT GTAACGGCGG GTATACACGT GCTCATGACC
AGGCTACCGC TCTACGGGGC CACGAAAATC GCCCTGCACT ACGCATCGGA GGCCCTCAGG
AGGGAGCTGT CAGACAGGGG CGTAAACCTC CTCGAAGTCT TCCCGGGAGT CGTGGAGACG
AGCTTCCACG AGAGAGCTGG GCTCGGCAGG CAGAAAGGGT ACCCCGCCCG GAGAGTCGCG
GTAGAGATAC TGGACGCTGT CGAGAAGAGG AAGAAAAAGC TCTACGTTCC ACGGTACCTA
GCCGCCCTAA GGCTCCTGGG CCCCTACCTG CCGGCCCTCT ACTGA
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| Protein sequence | MASAVITGAS SGIGRELSAE ACRRGYRVLG IGRNEAALRE LASEHPDCFA YLVLDLSDPA
SAERVAEFVS SEFRSLSLLV NNAGYGVGRG ILEMTPREIL DTVNVNFAAP LLLTKLLLPY
MERSGTVVNV VTAGIHVLMT RLPLYGATKI ALHYASEALR RELSDRGVNL LEVFPGVVET
SFHERAGLGR QKGYPARRVA VEILDAVEKR KKKLYVPRYL AALRLLGPYL PALY
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