| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1637 |
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| Symbol | |
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| ID | 4600916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1583594 |
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| End bp | 1584619 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639774410 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_921035 |
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| Protein GI | 119720540 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.188587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCTAA AAGAATATGT TCTTTACAGG GTATTGTTGA CCCCCGTGAT GCTCTTCGTC
CTTCTCTCCT TCGTTTTCAT ACTCATGAGG GTCCTCCCCG GAGACCCGAT AACGATGCTG
GAGGGGAAGA ACATCCCGGA GGAGGTGCTC GCCAGACGCA GGGCCGAGCT GGGTCTCGAC
AAGCCGCTGT ACGTGCAGTA CTTCGACTAC CTCTACTCCC TCTTCGTCAA GCGCGACCTC
GGCGAAACGG CCCTTGAGAG GATACCGGTG GCCTACCTCG TAGCCTCGCG GTTGCCGGCG
ACCATAGAGC TAACGGTGGC GGCCACGCTG ATCGCCGCGG CTCTGGGCAT CGCCCTGGGC
CTCCTCTCGG CGAGGTACCA GTACACCGGG GTACAGTACT TCGCGAGGTT CTACTCCTCG
GTGGTCTACT CGGTCCCGGT GTTCTACCTC GGCCTACTCC TCCAGGCCTA CCTCGCGAAG
CCCCTCGGCT TCCCGACGAC GGGGCGCCTG AGCCCGGTCA ACATGGTCGC TGTCGACAGC
CTACCGGTGA GGACGGGCTT CGTGTTCATC GACTCCTTAG CGGCCGGCAG GCTGGACATA
CTCCTGGACT ACCTGGCGCA CATAAGCCTG CCAGCCCTCA CCCTCGGGGT GTACCTCTCG
GGGGTCTTCT CGCGCGTAAC GTACCTCTCG GTCGAAGACG CTATGTCCCA GGACTACACC
CAGGCGGCGA GGGGCAGGGG GATCAGGGAG TGGACGGTCG TCAAGAGGTA CGGCCTGAGG
AACGCCCTCA TCCCGATACT GACGATGACG GGGCTACAGG TAGCCGCCCT CCTCGGGGGC
GCCGTCCTCA CCGAGACGAC GTTCAACTGG GAGGGGGTGG GGCTCCTGGT GTACGAGGGG
ATACTCAAGC GGGACTACGC GATCGTGCAG GGAGCGGTCA CCATATACGC CGTCCTCGTC
ACCCTGACGA GCCTAGTCGT GGACGTACTG TACGCCTACG TAGACCCCAG GGTGAGGTAC
GAGTGA
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| Protein sequence | MGLKEYVLYR VLLTPVMLFV LLSFVFILMR VLPGDPITML EGKNIPEEVL ARRRAELGLD
KPLYVQYFDY LYSLFVKRDL GETALERIPV AYLVASRLPA TIELTVAATL IAAALGIALG
LLSARYQYTG VQYFARFYSS VVYSVPVFYL GLLLQAYLAK PLGFPTTGRL SPVNMVAVDS
LPVRTGFVFI DSLAAGRLDI LLDYLAHISL PALTLGVYLS GVFSRVTYLS VEDAMSQDYT
QAARGRGIRE WTVVKRYGLR NALIPILTMT GLQVAALLGG AVLTETTFNW EGVGLLVYEG
ILKRDYAIVQ GAVTIYAVLV TLTSLVVDVL YAYVDPRVRY E
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