| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1621 |
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| Symbol | |
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| ID | 4601024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1566992 |
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| End bp | 1567678 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639774394 |
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| Product | bacterio-opsin activator |
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| Protein accession | YP_921019 |
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| Protein GI | 119720524 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAACCT TAAGGCCGTA CAAAGTTTAC ATGCGTCCTC AAAAAAGCCT TCTCAGCGAA
CTTACGAATT TACCAGGCAT CGAGATAACT GTGCTCAATA TTATACAGAG CGGAAGCACA
TACAAGACTT TAGCACACGC AACAACTTCT GGGAACCTAA AATTCTATCA AGTGTTAGAA
GAAATGAAGT TCAAAAACGA AATATTGGAT TTCAAGGTTT TGAACAAGAA TAAACAATCC
GTAACTTTTA TTCTTGAAAG GGATTATTGT ACATTCTACG ACTATACTTT AGGCACAGGA
AGATTTATAC TATTTCCCTA TGTAATTAAA AAAGGAACTA GAAAATTCTT TATCATTTCG
GAGGAAGAGC CCAGCATTCT TTTAGACAGG TTAAAGAAGT ATGGCACTGT GACGCGTATG
GAGAAAGTGC TACTAACGGA CGCCTTAAAG GATTCGTACG CGCTATTAAT GCGGACAGAC
CTATTATCGA AATTAACGCC TCTTCAGCGC AAAATACTCT CTAAGGCAAT AATAAAAGGT
TACTTTGACT GGCCGCGGAA GTACTCGTTG TCTGACCTCT CACAAGAGCT AGGCATCTCA
AAGGCTACGC TTGCAGAACA TATAAGAAGA TCCGAGTCGA AGATTCTAAA GTACCTTCTG
GAGGGGGGCG AGGGATTCAC GGAATGA
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| Protein sequence | MTTLRPYKVY MRPQKSLLSE LTNLPGIEIT VLNIIQSGST YKTLAHATTS GNLKFYQVLE
EMKFKNEILD FKVLNKNKQS VTFILERDYC TFYDYTLGTG RFILFPYVIK KGTRKFFIIS
EEEPSILLDR LKKYGTVTRM EKVLLTDALK DSYALLMRTD LLSKLTPLQR KILSKAIIKG
YFDWPRKYSL SDLSQELGIS KATLAEHIRR SESKILKYLL EGGEGFTE
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