| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1610 |
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| Symbol | |
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| ID | 4601902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1555845 |
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| End bp | 1556084 |
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| Gene Length | 240 bp |
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| Protein Length | 79 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639774383 |
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| Product | AbrB family transcriptional regulator |
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| Protein accession | YP_921008 |
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| Protein GI | 119720513 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00130858 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGGAAT CTGTTAGAGT TGGGAAGAGG TTCACAGTGG TTATCCCAAA GAGCGTGAGG
GAGAAGGTCG GCCTAAAAGA GGGGGATCTA CTGGAGGTTA GGGTGGAGGG GGGTAGGATA
GTCCTTGAGC GTAAAGATTT CAATCCGTTC AAAGTTCTCG CAGAGGTTAT CGGGGAACCT
TACAGGGAAG AGAGGGACGA AAGAAAGGCG GAAGAGTGGT TGAGGAATGC CTGTCGTTGA
|
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| Protein sequence | MSESVRVGKR FTVVIPKSVR EKVGLKEGDL LEVRVEGGRI VLERKDFNPF KVLAEVIGEP
YREERDERKA EEWLRNACR
|
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