| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1566 |
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| Symbol | |
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| ID | 4601524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1516041 |
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| End bp | 1517366 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639774339 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_920964 |
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| Protein GI | 119720469 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0665026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCTCG TTTTTCTCGG TGGCTACCGG GAGCAGGGGA GGTCCTGCCT AGCCTTGGAG
CACGGGGGGC GCTACTACGT ATTCGACGTC GGCGTGAAGA AGGTGTACTC CGGGGGCAAG
TACGGCGAGC CCCCGTTCCT CGGGCTGATA GACGCCGGGA AGGTAGAGGC GGTTTTCGTC
AGCCACCTCC ACGAGGACCA CCTCGCCGCT GTCCCGGCCC TCGTTAGGAG GGGTTTCAAC
GGCCCGATAT ACATGAGCGC GCCGACCGCC GAGCTGGGCA TCAAGCAGTG GTATAAGTGG
ACGGTCCTCG AGGAGGATGG TAAGCCCCTC TTCACGGAGG AGGACTGCGA CGAGGCCAGG
AAGATGGTGA AGACGGTCGG CGATGGTAGC GTGGTTACTA GCGGCGACGT CGAAGTAGCC
TTCCACCAGT CGGGCCACGC TTTAGGCTCG ATGTACATGG AGGTATCGGT GGGCGGCTGG
AGTATGCTCT ACGCCGCGGA CATAAACAGG GGGTCAAGCG TCTTCCGCGA CCCGGCCCCC
GCGCCCAGTA GCTACGACGT CGTAATAGCG AATGCCTCTT ACGGCGACAG AGTTGTGGAC
GCGGGAGTCG GGGAGCGGAG GGTGGCGGCG CTCGTCCTCG AAACTGTTAA GCGGGGCGGC
ACTGCGCTCA TACCGGTTAC AGCCGTGGGG AGGGGGCAGG AGACGCTCAT GATCCTCCTC
CGTAGCAGGG AGATCCTCGG GAGCGGGGCT CCCATATTCG TCGAGAAGTC TATAGCGGAG
GGCGTCGAGC GTGTCGCCGC GTACGAGGGC TACGTCAAGC CTGAGTTCCT CGAAGTTGCC
AAGAGGAAGC CCCACCTAGC GGAGCCCTTC CACGTCTTCT CGAAGGACGA GGTGGACGAG
GTTGCGCGCG TAAAGCCGTC CGTAGTGCTC GCAACCGACC TCATGTTGAT GGAGACTTCC
AGGAGGTTCT TCGAGAAGCT GAGGGAAGAC CCCTCCTCGT CCGTCATACT GACGGGCTAC
CAGGCTCCGG GCACGTTCGG CAGGAGGTTG CTCGATCACA GAGAGGCGGG TGCCTTCACG
TTTAACGGCG AAGTGGTCCG GTTCTCCTGC AGGGTCTACG ACGTCCCCGT CAAGATGCAC
TTCGACGTTA GGGATAACGT GGAGCTCGTC CAGAGGACTC TCAAGGAGGA GGGGTTGGTG
GTGCTCCACC ACGGAGAGGA GCCTAACTCC ACGAGGCTCG CGCTCCACCT CTTCAACTAC
GTCAAGCCGG AGAGGGTTGT AGTGCCGCAG GTACCCTCGG ACCTCTACCT GGTGAGGAGT
GGATGA
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| Protein sequence | MRLVFLGGYR EQGRSCLALE HGGRYYVFDV GVKKVYSGGK YGEPPFLGLI DAGKVEAVFV
SHLHEDHLAA VPALVRRGFN GPIYMSAPTA ELGIKQWYKW TVLEEDGKPL FTEEDCDEAR
KMVKTVGDGS VVTSGDVEVA FHQSGHALGS MYMEVSVGGW SMLYAADINR GSSVFRDPAP
APSSYDVVIA NASYGDRVVD AGVGERRVAA LVLETVKRGG TALIPVTAVG RGQETLMILL
RSREILGSGA PIFVEKSIAE GVERVAAYEG YVKPEFLEVA KRKPHLAEPF HVFSKDEVDE
VARVKPSVVL ATDLMLMETS RRFFEKLRED PSSSVILTGY QAPGTFGRRL LDHREAGAFT
FNGEVVRFSC RVYDVPVKMH FDVRDNVELV QRTLKEEGLV VLHHGEEPNS TRLALHLFNY
VKPERVVVPQ VPSDLYLVRS G
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