Gene Tpen_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1516 
Symbol 
ID4601112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand+ 
Start bp1463999 
End bp1464985 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content65% 
IMG OID639774291 
Productalcohol dehydrogenase 
Protein accessionYP_920916 
Protein GI119720421 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.997072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGCCG CGTTACTCTA CGGTCCGGGA GACCTGAGGG TCGAGGACGT ACCGCTCCCA 
GAGAAGCCGG AGGGATGGGC ACTCGTAAAG ACCCTCGCGG TCGGTATCTG CGGGACGGAC 
AAGGCGTTCT ACAAAGGCAC GTACCCGCTC TTCAAGAAGC CCCTCATCCC CGGGCACGAG 
GTCTCGGGGG TCGTCGTGGA GGGGCCGGAG GAACTCGTGG GCAGGCTCGT GGTCTCCGAG 
ATCAATTTCC CGTGCTGGAG GTGCGAGTAC TGCAGGTCGG GCCTCTACAC TCACTGCCCC 
TACAAGAAGA CTCTCGGCAT AGACTTCGAT GGGGGCCTCG CCGAGTACTT CGTCGCCCCT 
GCAACCGCGC TTCACGCCGC CGAGGGCTTA GACCCCGTAG TCGCCACCGA GGTCGAGCCC 
CTAGCGGCCT TGCTCAACGC GCTGAGGCTC AAGCCGCCCG CCCCGGGCGA CAGCGTAGCC 
GTGGTGGGAA CCGGGAACCT CGCCGTGATG CTCGTCCAGG TGCTCAAGGA CGCGGGCTTC 
AGGCCCGTCG TCGTCTCGCG GGCTGGTAGC TCCAAGGCAG AGATACTCAG GAGCCTAGAC 
GTTGAGGTGG TGACGGCAGA GCAGGCGTCC AGGCTGGGCG GCGAGTCCGG GGACGGCGTC 
GGGTTCGACG TGGTGTTCGA GGTCTCCGGG GACCCCTCAG CGCTTAACCT CGCGGTCGAC 
CTCGTAAAGC CGAGGGGCAC TGTTCACTTA AAGTCGACGC CCGGCAACCC TGGGAGCGTT 
AACCTCACCA AGGCCGTAGT CAAGGAGGTC GCCGTCATCG GCTCCAGGTG CGGTACCTTC 
AGGGAGTTCC GCGAAGCCAT AAGGCTGTTG AGAGAGGGGA GGGTGAGGCC CGTGATTACC 
AGCGTCTACG GCGGGTTGGA GAAGGCGAGG GAAGCCTTCG AGAGGTCGTT CAGGCCCGGA 
GAGGTAAAGG TCGTAGTCAA GCCATAG
 
Protein sequence
MKAALLYGPG DLRVEDVPLP EKPEGWALVK TLAVGICGTD KAFYKGTYPL FKKPLIPGHE 
VSGVVVEGPE ELVGRLVVSE INFPCWRCEY CRSGLYTHCP YKKTLGIDFD GGLAEYFVAP 
ATALHAAEGL DPVVATEVEP LAALLNALRL KPPAPGDSVA VVGTGNLAVM LVQVLKDAGF 
RPVVVSRAGS SKAEILRSLD VEVVTAEQAS RLGGESGDGV GFDVVFEVSG DPSALNLAVD 
LVKPRGTVHL KSTPGNPGSV NLTKAVVKEV AVIGSRCGTF REFREAIRLL REGRVRPVIT 
SVYGGLEKAR EAFERSFRPG EVKVVVKP