| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1454 |
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| Symbol | |
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| ID | 4600580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1405159 |
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| End bp | 1407378 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639774229 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_920854 |
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| Protein GI | 119720359 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.137251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAAGCA GAAAAATCGC CGCAATTTTG GCAATACTTC TCCTACTAGG AGTACTGATT
GGGACCTCTC AAGCAACAGC GGGACCCAGC CCCTCCTACC CGACGGGGGA TCCCCAGACG
TGGGTTATCT ACCAAATCGT CATCGATAGG TTCTACGACG GGAACACGTC GAACAACAAC
CCTGCGAAAA GCCCGGGTCT CTACGACCCC ACCAAGACTA ACTGGAGGCT GTACTGGGGC
GGCGATATCG ATGGTATAAT AGCGAAACTA CCGTACCTCT ATGAACTCGG AGTTACCGCT
ATATGGATAT CGCCTGTCTT CGACAATATA GACGTCGCTA TAAACACTAG TAGCGGCCTG
CAGGCAGGGT ATCACGGCTA TTGGCCTAAG GACTTTAAAG TAATAGAGGA ACACTTCGGT
TCCTGGAGCA CTTTCTACAA ACTCATACAG GAAGCCAGGA AGTACAACAT CACGGTAATT
ATCGATTTCG TTGTAAACCA CAGCAACCCA AGCGATGCCG GCGAATACGG AGCACTATAC
GATAACGGTA CGTTCGTCAC CGACTATCCA ACGGATGCAA AATACGCTAC GGTTGACCCA
ATAACTCGTA GTCTCTCGAA TATATACAAC CACAATGGGG GGATTACGAA CTGGAACGAC
AGGTGGGAGG TTAGGTACAA GAACCTGTTC AACCTGGCTG ACTTTAACCA GCTGAACCCT
TGGGTGGATA GATACCTCAA GGAATCTACG GCTTTGTACC TGAAGGCCGG TATCGGGGGG
ATACGGCTGG ACGCCGTTAA ACACGTGGAG CCGGGCTGGC TGAAGACGTA CGCCGACTAC
GTGTACGCGA TAAAAAACGT CTTCATGTTC GGAGAGTGGT ACCAAAGCTT TAACGACGAG
ATGTACTGGG ACATGGTTAA GTTCGCGAAC GACAGCGGGA TCAGCGTTAT CAACATACCG
CTTCAGCAGG TCCTAGTAGA CGTATTCGCC TACGACACAA AGACCATGTA CGACTTGGAC
AACGCGGTCA AGAAGTATAC GAGTAACTTT ATGTGGCAAA ACAAGCTGGT TAACTTTATA
GACAGCCACG ACGTGCCGAG GTTCCTCTCG CTGAGCAAGA GTATCACGAG GTTCCACCAG
GTGCTAGCAT TCGTGATGAC CGCCCCCGGC ATCCCGGTGA TATACTACGG GGACGAGCAG
TACCTACACT ACGACGCAAC GAACGAGTTC GGGCAGGTTG GGGGAGATCC TTACAACAGG
CCTATGATGA CATCCTGGGA CACTACGACC ACGGCGTTCA AGTTGATAAA AGCCTTGGCA
CAGTTAAGGC GCGCTAATAC CGCTCTAGCC TACGGCTTGG TAACCACGCG GTACGTGAGT
AGCGACGTGT ACATCTTTGA GAGAAAGTTC TTCGGAAACG TGGTCCTCGT AGCCATAAAC
CGGAACCTAA ACTCCCCGGT TGCCGTTTCC AATGTTTACA CTTCCCTCCC CGACGGGGTG
TACAGCGACT ATCTAGGAGG GCTTATCAAC GGGACAAGCA TCAAAGTCGT AGGCGGTAAG
TTCTCGGTAA CCTTGCCCCC CGGCTCCGTT TCCGTGTGGC AGTACAAAGC AGTACCGAGC
GGTCCATGGG TAGGAGCCAT AGACCCGACG ATGGGCAGGG CTGGGAACGT AGTCGTGATC
AGCGGGGAAG GGTTCGGTAG CCAGCCGGGA CAAGTCCTGA TAACGAACGG GCAGAGCACG
TGGAGCGCTA CAGTTACGTA CTGGAGTGAT AAAAGCATAG AGTTCATAGT TCCCTCAGGG
GTAACAACTC CTCTCAACGA CAACCACGTA ACGGTGATTG TTAAAAGAGC CGACGGGGCG
ACGTCGAACG GGATAGCTTT CCAGTACCTC TCGGGTAGAC AAATCCCCGT TATATTCGAG
GTGCAGAACA CCAAGGGAAC AACCCTGGAG ACAGTGCCTG GAGAGTTCCT GTGGCTAACC
GGTAGCGTCC CAGAGCTAAG CAACTGGAGC CCCGCAACTA CGAGGGCTGT GGGACCCATG
CTTTGCCCAG CGTGGCCTAA CTGGTTCGTC GTCGCCAGTG TCCCGGCGAA TACGTACATA
GAGTTCAAGT TCTTGAAGGC TCCGCTAGGC GGTACCGGGG TCTGGGAGCC TGGAAGCAAC
CATGCTTACA CTACTCCCTC GGACGGGATA GGAAGAGTGT CCGTCACTGC TAACGGGTAA
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| Protein sequence | MRSRKIAAIL AILLLLGVLI GTSQATAGPS PSYPTGDPQT WVIYQIVIDR FYDGNTSNNN
PAKSPGLYDP TKTNWRLYWG GDIDGIIAKL PYLYELGVTA IWISPVFDNI DVAINTSSGL
QAGYHGYWPK DFKVIEEHFG SWSTFYKLIQ EARKYNITVI IDFVVNHSNP SDAGEYGALY
DNGTFVTDYP TDAKYATVDP ITRSLSNIYN HNGGITNWND RWEVRYKNLF NLADFNQLNP
WVDRYLKEST ALYLKAGIGG IRLDAVKHVE PGWLKTYADY VYAIKNVFMF GEWYQSFNDE
MYWDMVKFAN DSGISVINIP LQQVLVDVFA YDTKTMYDLD NAVKKYTSNF MWQNKLVNFI
DSHDVPRFLS LSKSITRFHQ VLAFVMTAPG IPVIYYGDEQ YLHYDATNEF GQVGGDPYNR
PMMTSWDTTT TAFKLIKALA QLRRANTALA YGLVTTRYVS SDVYIFERKF FGNVVLVAIN
RNLNSPVAVS NVYTSLPDGV YSDYLGGLIN GTSIKVVGGK FSVTLPPGSV SVWQYKAVPS
GPWVGAIDPT MGRAGNVVVI SGEGFGSQPG QVLITNGQST WSATVTYWSD KSIEFIVPSG
VTTPLNDNHV TVIVKRADGA TSNGIAFQYL SGRQIPVIFE VQNTKGTTLE TVPGEFLWLT
GSVPELSNWS PATTRAVGPM LCPAWPNWFV VASVPANTYI EFKFLKAPLG GTGVWEPGSN
HAYTTPSDGI GRVSVTANG
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