| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1352 |
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| Symbol | |
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| ID | 4602189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1303733 |
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| End bp | 1306297 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639774127 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_920752 |
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| Protein GI | 119720257 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0456813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGGGG TTGTCTCGAA GCTACGCGCC TACGCCTCCT TCCTCGCGTG GCTCGCCGGC
GTCTACTCGG AGCCGTGGCT GTCCGCCTTG GCGCTACGCT TGCGCAAGCT CTCGATCACC
GCTAGGCTGA GGCTCACGGC TACCCTGAGG GGGGCCGAGT ACCCCTTCTC CGCTCTGCAC
CCCGCGGTGA GGAAGGCGAT CCGTGGGAGA GAGCGCGAGC TTAGGGAGCC GACGCCGATC
CAGGTCCTCG GGATACCCAG GATACTCAGG GGGGAGAACG TCCTCCTAGT GGCGCCGACG
GGCTCCGGGA AGACTGAGTG CGCCTTCCTG CCCGTTCTAC ACTTCCTGGC CGCCGAGAGG
GAGGCTGGGA GGCTGGAGCC AGGGGTTTAC GTGCTTTACA TCACCCCCCT GAGGGCGCTC
TGTAGCGACG TCGCGAGGAG GCTTAGATCC TACGTCCGCT CGGCCCTCGG CGACGGCTAC
CTCGTGGGCG TGTGGCATGC CGACATCAAG AAGAACGAGA AGACGAAGCT CGCCGAGAAG
CCCCCGCTCG TCCTCGTTAC CACCCCGGAG TCCCTGGAGG CAATCCTCGA CACCAAGCAC
AGGTTCCGCA AGCACCTCGC GAAGCTGAGG TGGGTCATAG TGGACGAGGT CCACGAGCTC
GCAGAGTCGA AGAGGGGGTT GCACCTCCTC GTCCTCCTCG AGAGGCTGAA GGCGACCTTC
GGGATCCCGA GGCTCCAGAG GATACTCATC TCCGCGACAG TCGGCGACCC CCGCAGGATA
GCGCGGCTCT TCGGCGGGTC GGACGGGAAG GTCCGGGTCG TGCGGGATCC CGGGCTCAGG
AGGATTGACG CGGAGGTCGT GCTACGCCGC GGTAGGAGCG CTGAGGAGCT CGTAGACGCG
CTCGAAGAGC TAATGGGGAA GGGTAGCGGG TACCTCGTAT TCGTCAACAC GAGGTCCGAG
GCGGAGGAAC TCCACGCGGA GCTCGAGAAG AGGGGGCTGG GCGATATACT CGTGCACCAC
GGCTCGATGG GCGCGTCGAA GAGGAGGGAG GCTGAGAGGA AGTTCAAGGA CCGCGAGGTG
AAAGCCGTCG TGTGCACTAG GACCCTCGAG CTAGGGATAG ACGTGGGGTC CGTTGAAAGG
GTCTTCCAGG TCGGGTCCCC GTCCCTGCCG GCGTACTTTG CGCAACGCGT CGGGAGGGCT
TCGCACAGGC CCGGCGAGCC CGCTAGGGGG ACTCTCGTGT GCCTCGACAT GAACGACCTC
GTGGAGTCCG CGGCCATACT GTCCATGCTC GGCAGGGGCT CGTTCGGAGC GAGAAGAGGG
CCTCCGCCGG CAATGGACCT AGCCCTGCGC CAGGCCCTAG CCCTGGTACT ACAGCACGGG
GACAAGGCGG GCGCTCAGGC TGTCGCAGAG CTCCTGGGCT CGCTCCTCTC GCACGTACCC
GCGTCCTGGG GCCTCGGCGC TAGAGAGGCG TTGAGGGTGC TGGAGGAGAG GGGCCTCGTC
GAGGAGAGAG AAGTCGTGGA CGTCTACGGC GAGAGGGCGA GGGTGCTCAG GCTCGGGGGG
CGCTTCCCCG AGGCGTGGCG TAAGATCGGC GCGTTCTTCA CGATGATCCC CGAGAGGAGC
GAGCTGGAGG TGAGGCACGG GCGGGAGAGG GTGGGCGTCG TGGACGTAGT CAACCTGAGG
CTGATGAAGA GGGGCGTTGT CATCAGGCTG GGGGGTAAGT GCTGGAGGGT GAAGGAGCTG
AGGGGGCGCT TTGTGATCGT AGAGCCCGAG GCCTCTGACC GCTTCGCCAT CCCCGTGTGG
AGGGGCGGCT ACGTGCTGGC ACCTCAGAGC GTGGGGCTAG AGGTGTACCG CTTCCTCTCG
AAGGCCGCGA GGCTTCACAG GAGAGGCACC TCACTCGGCG AGTGGAGATC CGGCGGAGTG
GCGTTCAGGC TCGACGAGGA GGCTAGGAGG GGCCTCGCCG TGCTCGCAGA GGAGCTCTCG
GCGCGCGGCG TGCCCATGCC CGGCCCCCGC AGGATGGTCG TTGACAGAGT TAAGGCCAGC
GCTCTAGGCG CGCTGGACAG GTTCCTGGGC GTATCCCCAG AGCCTCGCGC CACGACGACT
GTTCTCCTCT ACCCCTTCGG CGACTACATC GCGAACACCC TGGCGGCGTT GCTCTGGAGT
AGCGGGAGTG TGAGCAAGGT GATCCCGAGG AGCTACGGCA TCCTGGTCCG CCACGAGGCC
AGCTTCGACC CGTTGGAGTA CCTCCTGGGC GCGGGCCGAA GGGAAGTCGA GGAGGCCGTG
AAGAGCTCGC CCTACGTCTA CGTGGTAGCG TTCGAGCTCA GGAGGAGCTT CGGGTACTCC
CGCATAAGCG AGAAGACCCT AGAGGAAGAC AAGCTCCTGC GCGAAGAGTG CGTGAGGCAG
GCGAAGCACA GGTTCTACGA CGTGGAGGGG GCGCTCAGGC TACTCGACTG GGTTAGGCAT
GGGTGTATCT CTGTCTCCGA GAGGCTTGTC GAGAGAGTAG GGGACCTGCA CCCCGTCTCG
CGCTACCTCT TCGAAGCGGA AAGGCCTCCC GCGCCCGCCG CCTAG
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| Protein sequence | MSGVVSKLRA YASFLAWLAG VYSEPWLSAL ALRLRKLSIT ARLRLTATLR GAEYPFSALH
PAVRKAIRGR ERELREPTPI QVLGIPRILR GENVLLVAPT GSGKTECAFL PVLHFLAAER
EAGRLEPGVY VLYITPLRAL CSDVARRLRS YVRSALGDGY LVGVWHADIK KNEKTKLAEK
PPLVLVTTPE SLEAILDTKH RFRKHLAKLR WVIVDEVHEL AESKRGLHLL VLLERLKATF
GIPRLQRILI SATVGDPRRI ARLFGGSDGK VRVVRDPGLR RIDAEVVLRR GRSAEELVDA
LEELMGKGSG YLVFVNTRSE AEELHAELEK RGLGDILVHH GSMGASKRRE AERKFKDREV
KAVVCTRTLE LGIDVGSVER VFQVGSPSLP AYFAQRVGRA SHRPGEPARG TLVCLDMNDL
VESAAILSML GRGSFGARRG PPPAMDLALR QALALVLQHG DKAGAQAVAE LLGSLLSHVP
ASWGLGAREA LRVLEERGLV EEREVVDVYG ERARVLRLGG RFPEAWRKIG AFFTMIPERS
ELEVRHGRER VGVVDVVNLR LMKRGVVIRL GGKCWRVKEL RGRFVIVEPE ASDRFAIPVW
RGGYVLAPQS VGLEVYRFLS KAARLHRRGT SLGEWRSGGV AFRLDEEARR GLAVLAEELS
ARGVPMPGPR RMVVDRVKAS ALGALDRFLG VSPEPRATTT VLLYPFGDYI ANTLAALLWS
SGSVSKVIPR SYGILVRHEA SFDPLEYLLG AGRREVEEAV KSSPYVYVVA FELRRSFGYS
RISEKTLEED KLLREECVRQ AKHRFYDVEG ALRLLDWVRH GCISVSERLV ERVGDLHPVS
RYLFEAERPP APAA
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