| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1350 |
|---|
| Symbol | |
|---|
| ID | 4600874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 1301268 |
|---|
| End bp | 1302689 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639774125 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_920750 |
|---|
| Protein GI | 119720255 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0120056 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTAAGG AGTACGCGCT GGAGTGGATA GACGGCTACA GGGAGAGGCT GGTCAAGGTC
TCCGACGCGA TCTGGGAGTA CGCGGAGCTC GGCCTCAGGG AGTTCAAGTC CTCCAGGCTC
CTCGCGGGCG AGCTCGAGAG GCACGGCTTC AGGGTCGAGA TGGGGGTCGC CGGGATGCCC
ACCGCCTTCG TCGCGACGTG GGGTAGCGGG AGGCCCGTCA TCGGGATCCT CGGGGAGTAC
GACGCGCTGC CGGGGCTCTC CCAGAAGGTT GTCCCGTGGA GGGAGCCCCT CGTCCCCGGG
GCGCCGGGGC ACGGGTGCGG GCACAACATC CACGGGGCTT CCGGGATGGC GGCGGCGCTC
GCCGTCAAGG CGGCGATGGA GAGGGAGGGG CTGGGGGGCA CTGTGAAGTT CTTCGGTTGC
CCGGCGGAGG AGAACTTCAG CGGCAAGGTG TTCATGGTGC GCGACGGAGT GTTCGAGGGC
GTTGACGCTG TTCTCAGCCA CCACCCCGGC GACATGAACG CGGCTACGCT TAAGAGTAGC
CTTGCGGTGA ACTCCGCGAG GTTCCACTTC TACGGGAGGG CTTCCCACGC CGGCGCGTCG
CCGGAGGAGG GGAGGAGCGC GCTCGACGCC GTCCAGCTGA TGAATATAGG CGTGGAGTTC
ATGAGGGAGC ACTTGCCGCA GGACGCGAGG GTCCACTACG TCGTGGAGAG GGGTGGGGGC
CAGCCGAACG TTGTCCCAGA GTACGCGAGG GCCTGGTACT ACGTCAGGGC GCCGGAGAGG
GAGGAGGTCG AGAGGATATA CAGCTGGGTC GTGGACATAG CGAGGGGAGC CGCGCTGATG
ACGCAGACGA GGGTCGAGGT GGAGTTCCTC GAGGGTGTCT ACAACCTCCT GCCGAACAGG
GTTCTCGCGG AGCTCGTCGT GGGGAACATG CGCGAGGTTG GGCTACCGGA GTACAGCGAG
GAGGACTTGA GGTTCGCCGA GGAGATAGCC AAGACGATAC CGAGGGAGGT GAAGGTGGGC
CAGCTGAGGA AGTCCGGGAG GCCCGGCTGG GAGCGGCTCG TGGACAAGCT CATCGACGAC
GAGGTCCCGG ACCCGTGGGG CGAGGGGACG GTGATGCACG GCTCGACGGA CGTAGCCGAC
GTCAGCTGGC AGGCGCCAAC ACTGGAGTTC AGCACCGCCG CCTGGGTCCT CGGAACCCCC
GCGCACTCCT GGCAGGCAGT CGCCCAGTCA GCCGCCGGGA TCGGGCACAA GGCGCTGATC
TTCGCGTCGA AGGTGCTGGC CGCCTCGGCC CTCGACCTGC TCACGAAGCC CGAGATCCTG
GAGAAGGCGA AGGAGGAGCA CAAGAGGAGG CTCGCCGGGC GCGTCTACAG ATCCCCGCTA
CCACCGGGCC ACAAGCCCCC GCTCGACGCG TGGGAGAAGT AG
|
|---|
| Protein sequence | MVKEYALEWI DGYRERLVKV SDAIWEYAEL GLREFKSSRL LAGELERHGF RVEMGVAGMP
TAFVATWGSG RPVIGILGEY DALPGLSQKV VPWREPLVPG APGHGCGHNI HGASGMAAAL
AVKAAMEREG LGGTVKFFGC PAEENFSGKV FMVRDGVFEG VDAVLSHHPG DMNAATLKSS
LAVNSARFHF YGRASHAGAS PEEGRSALDA VQLMNIGVEF MREHLPQDAR VHYVVERGGG
QPNVVPEYAR AWYYVRAPER EEVERIYSWV VDIARGAALM TQTRVEVEFL EGVYNLLPNR
VLAELVVGNM REVGLPEYSE EDLRFAEEIA KTIPREVKVG QLRKSGRPGW ERLVDKLIDD
EVPDPWGEGT VMHGSTDVAD VSWQAPTLEF STAAWVLGTP AHSWQAVAQS AAGIGHKALI
FASKVLAASA LDLLTKPEIL EKAKEEHKRR LAGRVYRSPL PPGHKPPLDA WEK
|
|---|
| |