Gene Tpen_1309 details

Gene Information

• Locus tag: Tpen_1309
• ID: 4601603
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 1252980
• End bp: 1253558
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 639774084
• Product: PaREP8 domain-containing protein
• Protein accession: YP_920709
• Protein GI: 119720214

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00105694
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGGAAGG TCGAGGAGTT GCTCGCCGAG TGGCCGGAGG TGGCCGGGGT GTGCGCGAGG 
CTCGCGGCCG GCGAGAGGCT CGGGGAGGGC GAGGCCGTGG TCAAGGAGGT CGCGGAGGCG 
GCGGGGTGGG GCGTCGACGA CGTAGTGGAG GACCTCGCCC GGATCGGGGT CGACCCCTCC 
GGGAGGGTGG AGAGGTACAG GGAGCTCTTC GAGAAGTACT ACGCCGAGGC ACTCGAGCTC 
AAGAGGAGGG GCGACGCGAG GCAGGCAGGG GAGAAGCTCT GGGGAGCGGT GACGGCGCTC 
ATCAAGCTCT ACGCGGCGGA GAAGGGGGTC TTCGTGGCCC ACTGGAGTAC GGGCAAGCTG 
GACAGGTTCG TGACGAGCAA CGTCGGCAAG GAGCACAGGA AGCTTTTCAG GGACCTAATC 
GACAAGGCAC ACAGGCTCCA CGAGAACTTC TACGAGGGAA GCCTCGACCC CGAAACCCTC 
GAGGAGCGCT GGGCCGAAGC CCTCGACCTA CTCGAAAAAG CCAAGAGAAT CGTGCTCGAC 
GAGCGGCGAA GCGAGAAGAC ACGACAAGCC CCGCCCTAA 

 

Protein sequence

MGKVEELLAE WPEVAGVCAR LAAGERLGEG EAVVKEVAEA AGWGVDDVVE DLARIGVDPS 
GRVERYRELF EKYYAEALEL KRRGDARQAG EKLWGAVTAL IKLYAAEKGV FVAHWSTGKL 
DRFVTSNVGK EHRKLFRDLI DKAHRLHENF YEGSLDPETL EERWAEALDL LEKAKRIVLD 
ERRSEKTRQA PP