| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1297 |
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| Symbol | |
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| ID | 4600651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1239362 |
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| End bp | 1241035 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639774073 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_920698 |
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| Protein GI | 119720203 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00968279 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGGGG AGCCGGTCGT TGTGCCCGAG CCGGCGAGGC TCGAGTTCGG GGGGCGCTGG
TTCAGCTTCG ACGGCTTCTC GAACCTCGAC CCCTTCGTAG CCGAGGAGTT CCGCCTGCCC
AGGGGGGAGT GGGAGGTTCG GAGGGTTGAG GGGGAGGGGA CGGGCCTCGA GGTCAAGGAA
GGCTTCGTCG AGGTGTGGGG GGATCCGAGG GTCTACACGG CGACGTTGAT CCAGCTGGTC
ATTCAGGGGG GTTACCGCGC CATCCCGGAG GTCAGGGTCG AGGAGAGGTT GCGCTTCGAG
TTCCGGGGCT TCCACCTAGA CGTTGCGCGC GGCGGCGTGG CGACTGTGGA GGAGCTGAAG
AGGCTTCTGC GCTGGCTCTT CCTCCTGAAG TACAACTACC TGGCCGTCTA CGTCGAGGAC
CTCTTCCCCT GGGACCGCTA CCCGGACATC GGGGCGAGGC GGGGCAGGTA CACGGGCAAG
GAGTGGAGGG AGGTTGTGGA GTACGGGGGT AGGCTCGGGG TGGAGGTCTT CCCATCGCTC
GAGCTGGCCG GGCACATGGA GAACATCCTG TCCCTGCCGG GGTACCGGAG GTTCAGCGAG
TGGCATAGGC CGGAGGAGGG GTGCCTGGAC GTGGGCGACC CCGAGGCTAG GAGGTTCGCG
GAGGAGTTGC TGGAGGAGGC GCTCGAGAAG ACGAAGTCGA GGTACATCCA CATAGGCGGC
GACGAGACCT GGGCGATGGG GAGGGGGAGG AGCCTGGACA GGACCCTGAG GTTCGAGTGG
CCGCGGCTCT ACGCCGAGCA CCACTCCAGG CTGCTTCGGC TGGCCAGGGA GCGCGGCAAG
ACCCCGCTGA TCTGGGGCGA CATGCTCGCC GGCATGTACC TGCGCGAGAC CGAGAGGGAT
CTGTGGAGGC CGATCCTCGA GAACCCGGCG TGGAGGGAGG CCGTGGTGGC GAACTGGGAC
TACTCGCCCG GCACCGTCGA GTACTTCAAG CAGAAGATCC GGCTCTTCAA GGAGAGAGGC
TACGAGCAAA TCGTCTGCCC GGGCCTCTGG AACTGGGACA GGTACTACCC CGACTTCGAC
GCCGCCCTGG CGAACGTGAA GAGCTTCCTG CAGGCGGCGC GGGAGGAGGG AGTCAAGGGC
TTCATGGTGA CCGCGTGGGG CGACGACGGG GAGGAGTGCC TCTACTCCTT CCTGTACCCG
CTCATCCTGG CCTCGATGGA GTACGCCGAG GGCAACGGCA GGTGGGAGGA GAAGTGGCTC
GCGCTCAGCG GGGAGCCGCG CGAGGTGCTG GAGGTCAGGA AGGCGCTCGG CAAGGGCGAG
GTCGCCAACT ACGTCAAAAG GGTGCTCTTC TCCCCCACGG ACGAGGTGAA GGGCCTCCCG
GTCTTCGACG AGTGGAGGAA GGCGCTCGAG CTGGCGGAGA GAGTCAGGCT CCCACCAGAC
CTCGAGTTCG TGAAGCGTTG CCTGGAGGTG GGCCTGAGGA AGGTGGAAGG AAAGGCCACG
GCAGCCGACC TCCTGGGGCT CGCCAGCCTC TACGCGGACC TCTGGCTAAG GGAACGCAAG
CCAGCGAACC TCGCCAGGGT CTACGCCCGC TTCTACAGCG CCGCCGCCTT AGGCCGCGCG
CCCAAAGCCC GGCGCAGAGC AAAGCCGGCC TCGTCACCGC ATAAAAGGGT TTAG
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| Protein sequence | MGGEPVVVPE PARLEFGGRW FSFDGFSNLD PFVAEEFRLP RGEWEVRRVE GEGTGLEVKE
GFVEVWGDPR VYTATLIQLV IQGGYRAIPE VRVEERLRFE FRGFHLDVAR GGVATVEELK
RLLRWLFLLK YNYLAVYVED LFPWDRYPDI GARRGRYTGK EWREVVEYGG RLGVEVFPSL
ELAGHMENIL SLPGYRRFSE WHRPEEGCLD VGDPEARRFA EELLEEALEK TKSRYIHIGG
DETWAMGRGR SLDRTLRFEW PRLYAEHHSR LLRLARERGK TPLIWGDMLA GMYLRETERD
LWRPILENPA WREAVVANWD YSPGTVEYFK QKIRLFKERG YEQIVCPGLW NWDRYYPDFD
AALANVKSFL QAAREEGVKG FMVTAWGDDG EECLYSFLYP LILASMEYAE GNGRWEEKWL
ALSGEPREVL EVRKALGKGE VANYVKRVLF SPTDEVKGLP VFDEWRKALE LAERVRLPPD
LEFVKRCLEV GLRKVEGKAT AADLLGLASL YADLWLRERK PANLARVYAR FYSAAALGRA
PKARRRAKPA SSPHKRV
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