Gene Tpen_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1277 
Symbol 
ID4600744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1216769 
End bp1217206 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content51% 
IMG OID639774053 
ProductDNA polymerase beta subunit 
Protein accessionYP_920678 
Protein GI119720183 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.288341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAAGCC TGGAGGAGAT TAAGTTCTAC GAGATAGACC TCGAAAAAGT AGTCGAAACG 
CTGAAAAAGT ACTTCGAGAA GAGAAGCGAC GTCGCAGTAG CAGTCCTATT CGGCTCCGCG
CTCAGAAGAA GAAAAGTCAG AGACATAGAC ATCGCGGTAC ACGCAGACTG GAGCCTAGAA
GAACTACTCG AAGCCACCGC AGAGCTAGAA AAAGAGCTGG GAACCCCCGT AGACATCGTA
CCCCTACCCA ACGCCCCACC ACAAGTAAGA CTAAAAGCGC TGGCAGAAGG CCTACCCATA
ACCGTGAAAA ACCACGCACT CTACACAGAG CTACTCAAAG AGGCAATCGG GGAAACAAGA
GACATGGAGG CAAAACTCAG AGAAGAACGC CGGGCAAAAG ATCGTCGACA ACGGCGAGGA
GAGACGGCGA AGACTTAA
 
Protein sequence
MRSLEEIKFY EIDLEKVVET LKKYFEKRSD VAVAVLFGSA LRRRKVRDID IAVHADWSLE 
ELLEATAELE KELGTPVDIV PLPNAPPQVR LKALAEGLPI TVKNHALYTE LLKEAIGETR
DMEAKLREER RAKDRRQRRG ETAKT