Gene Tpen_1276 details

Gene Information

• Locus tag: Tpen_1276
• ID: 4600743
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 1216222
• End bp: 1216755
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 639774052
• Product: hypothetical protein
• Protein accession: YP_920677
• Protein GI: 119720182

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.370677
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCCGTGT CCGCCGAGTA CATCGTGAAG CTCTTCGAAG AAGACCCCAA GTCCAGGAAG 
AGGCTCGCAG AGCTACTAGT CTCCGAGCCG GACGTAAGGC TAGCGCTGAT AAACGCAGTC 
ATACGCGACG TCGCCACGAA GCACGACGTG GAGAAGCACT GGGAAGCAAC GAGGCGAGAC 
ATAGAGGGGC TGAGGAGGGA GCTTGAGGGG CTGGAGAGGG ACGTCGCGAG TCTCGCTGAG 
AGAGTCTCAA GGCTCGAAGG AGCATACGCA GAGCTAAGCA AGAGGATAGA CAGCCTCGGC 
GAGAGGATAA GCGACCTAGA CAAGAGAATA GACTCGCTCG ATAAGAGGAT CGACGGGCTA 
GACAAGAGGA TAGACTCACT GGATAAAAGG ATAGAGTCCC TGGACAAGAG GATAGACAGC 
CTGGACAAAA GGCTAGACCA CATCGCGAAG ATCTCCTACA CCCTCACAGC CTCAGTCCTC 
GCAACACTCG CGGCAAGCAT CATACTCCTC GCAATCATCA GGATACACCC CTAG 

 

Protein sequence

MSVSAEYIVK LFEEDPKSRK RLAELLVSEP DVRLALINAV IRDVATKHDV EKHWEATRRD 
IEGLRRELEG LERDVASLAE RVSRLEGAYA ELSKRIDSLG ERISDLDKRI DSLDKRIDGL 
DKRIDSLDKR IESLDKRIDS LDKRLDHIAK ISYTLTASVL ATLAASIILL AIIRIHP