| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1273 |
|---|
| Symbol | |
|---|
| ID | 4600740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 1213354 |
|---|
| End bp | 1214310 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639774049 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_920674 |
|---|
| Protein GI | 119720179 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTGAGAA AATTTTTGTA CCGGGCGTGC GTCCAGGCGG GCGGTATGAT AGAGGTTAGG
GGCGTCTACA AGAGCTTCGG GAAGGCGAGG GTCCTCGAAG ACGTCTCGTT CTCCGTGAGG
AACGGGGAGG TCGTGGGCTT CGTAGGGCTG AACGGCGCCG GCAAGACCAC CACGATCAGG
ATAACCGTCG GCGTGCTACC CCCGGACGCG GGCGACGTCT TCATCGACGG GTACTCCGTG
TCCGAGGACA AGGTCGAGGC GTCGGCCAGG GTGGGCTGGG TGCCGGAGCT CCCGATATTC
GAGTCCGAGT ACAGGGCGCT CGACTACTTC GCGTACCTCG CCGGCTACTA CGGCTACTCG
GAGGGGGAGG CGAGGAGGCT CGGGAGGGAG CTCTTCGAGA GGGTCGGGAT AGGCGAGGCG
GCGAACAAGA GGCTCGAGGA GTTCTCCCAG GGCATGAAGA AGAGGTTCGC CCTCGCAGTC
TCGCTGATCA ACGACCCGCC GAACTTCCTG TTCGACGAGG TTCTCAACGG GCTCGACCCC
CAGGGGATAG CCTTCTTCAG GGGGCTCGTG CAGGAGTTCA GGAAGGCGGG CAAGGCGGTC
CTCTTCTCCT CGCATATACT GAGCGAGGTG GAGGGGCTGG CGGACAGGGT AGTCTTCATA
CACAGGGGCA GGATCGTCGG GACGTACACG ATGGACGAGA TCAGGCGGAG GGCTTCCGGA
GAGCTACTCG TCTCGGTCTC CCCGCTGGAC GACGGGGCCG CCAGCATAGC GGCGAAGTAC
GGCGAGCCGG AGAAGAGGGG CAACGCGCTT GCAGTGAAGG GCTTCTCGGG AGACCCGTCG
AGCCTCGTAG CGGAGCTCGT AGCCGCCGGC TACAGGGTGG CCGAGGTGAA GCGGAGCGAG
AAGAGCCTCG AGGAGTTCTT CTTCGAGCTC GTAGGGCTAC GGGGTGACGG CGCGTGA
|
|---|
| Protein sequence | MLRKFLYRAC VQAGGMIEVR GVYKSFGKAR VLEDVSFSVR NGEVVGFVGL NGAGKTTTIR
ITVGVLPPDA GDVFIDGYSV SEDKVEASAR VGWVPELPIF ESEYRALDYF AYLAGYYGYS
EGEARRLGRE LFERVGIGEA ANKRLEEFSQ GMKKRFALAV SLINDPPNFL FDEVLNGLDP
QGIAFFRGLV QEFRKAGKAV LFSSHILSEV EGLADRVVFI HRGRIVGTYT MDEIRRRASG
ELLVSVSPLD DGAASIAAKY GEPEKRGNAL AVKGFSGDPS SLVAELVAAG YRVAEVKRSE
KSLEEFFFEL VGLRGDGA
|
|---|
| |