Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1260 |
Symbol | |
ID | 4600426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 1196724 |
End bp | 1197548 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639774036 |
Product | hypothetical protein |
Protein accession | YP_920661 |
Protein GI | 119720166 |
COG category | [S] Function unknown |
COG ID | [COG2512] Uncharacterized membrane-associated protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGAGCG GTGTAACCGC GTTCGCGCTA CTCGCCCTGC TCGCGGCGAC CCAGCTCGCG CTCGCCCAGC CCCTGGAGGT TCTCTACGTA CTGCCGGGCG GCCTGGTACA GGGCTACGTC GTCTTCACGG TTCCGGGGAC GGGCTTCGCC GAGTTCAAGC TTCCCGGCTC GGTCGAATCC CTCGGGGTCA CGGGTACGGG CTCCTCGCCC CCCGTCTTCA ACCTCAGCGG CGGCGTTCTC TCGGTGCTCG CAGACCCGGG CTCCACTGTC AACGCGTCCT TCGTGTCCAG GCTTCCGCGC GACTCCGTCA CCACGCTGAG CGTGCCGGCC GAGAACCAGT CCCTCAAGGT CTACGTGAGT AGCGAGTACG TCGTGCTAGG CGTATCCCCC ACGCCGACAA CCATAGCCTA CACGCAGGGC TACGTGCTCC TAGGCTTCGA CGTGCTCGCG GAGGACCTCC AGGTTGTACT CGTCGAGACG GGTTCCGCGC AGGCTGGGCA GGGAGCCCCC GCCGCGCAGC AAGGCGGTGC CCCTCAGTTG CAGCAGCTCC TGCCCTACGC CGTGCTCGTA GCGGTTGCCG TCGCCGCGGT GTTGCTGGCG CTGAGGCTGA AGAGGAGGGG GGAGGGGGGC GTGGTGCTAG AGGAGGACGA GGCGATACTG GACTTCCTGA GGCGTAGCGG GGGGAGGGCT TACCTCAAGG AGATCAGGGA AGCCCTGGGA ATCCCCTCGA CTACGCTCCT GAGGAGGGTT AGGAGGCTCG AGAAGGCAGG CTACCTCAGG CTCGAGAAGA CCCCCGGAGG GCTCCTAGTG ATACTCAAGA AATAA
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Protein sequence | MKSGVTAFAL LALLAATQLA LAQPLEVLYV LPGGLVQGYV VFTVPGTGFA EFKLPGSVES LGVTGTGSSP PVFNLSGGVL SVLADPGSTV NASFVSRLPR DSVTTLSVPA ENQSLKVYVS SEYVVLGVSP TPTTIAYTQG YVLLGFDVLA EDLQVVLVET GSAQAGQGAP AAQQGGAPQL QQLLPYAVLV AVAVAAVLLA LRLKRRGEGG VVLEEDEAIL DFLRRSGGRA YLKEIREALG IPSTTLLRRV RRLEKAGYLR LEKTPGGLLV ILKK
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