Gene Tpen_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1260 
Symbol 
ID4600426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1196724 
End bp1197548 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content66% 
IMG OID639774036 
Producthypothetical protein 
Protein accessionYP_920661 
Protein GI119720166 
COG category[S] Function unknown 
COG ID[COG2512] Uncharacterized membrane-associated protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAGCG GTGTAACCGC GTTCGCGCTA CTCGCCCTGC TCGCGGCGAC CCAGCTCGCG 
CTCGCCCAGC CCCTGGAGGT TCTCTACGTA CTGCCGGGCG GCCTGGTACA GGGCTACGTC
GTCTTCACGG TTCCGGGGAC GGGCTTCGCC GAGTTCAAGC TTCCCGGCTC GGTCGAATCC
CTCGGGGTCA CGGGTACGGG CTCCTCGCCC CCCGTCTTCA ACCTCAGCGG CGGCGTTCTC
TCGGTGCTCG CAGACCCGGG CTCCACTGTC AACGCGTCCT TCGTGTCCAG GCTTCCGCGC
GACTCCGTCA CCACGCTGAG CGTGCCGGCC GAGAACCAGT CCCTCAAGGT CTACGTGAGT
AGCGAGTACG TCGTGCTAGG CGTATCCCCC ACGCCGACAA CCATAGCCTA CACGCAGGGC
TACGTGCTCC TAGGCTTCGA CGTGCTCGCG GAGGACCTCC AGGTTGTACT CGTCGAGACG
GGTTCCGCGC AGGCTGGGCA GGGAGCCCCC GCCGCGCAGC AAGGCGGTGC CCCTCAGTTG
CAGCAGCTCC TGCCCTACGC CGTGCTCGTA GCGGTTGCCG TCGCCGCGGT GTTGCTGGCG
CTGAGGCTGA AGAGGAGGGG GGAGGGGGGC GTGGTGCTAG AGGAGGACGA GGCGATACTG
GACTTCCTGA GGCGTAGCGG GGGGAGGGCT TACCTCAAGG AGATCAGGGA AGCCCTGGGA
ATCCCCTCGA CTACGCTCCT GAGGAGGGTT AGGAGGCTCG AGAAGGCAGG CTACCTCAGG
CTCGAGAAGA CCCCCGGAGG GCTCCTAGTG ATACTCAAGA AATAA
 
Protein sequence
MKSGVTAFAL LALLAATQLA LAQPLEVLYV LPGGLVQGYV VFTVPGTGFA EFKLPGSVES 
LGVTGTGSSP PVFNLSGGVL SVLADPGSTV NASFVSRLPR DSVTTLSVPA ENQSLKVYVS
SEYVVLGVSP TPTTIAYTQG YVLLGFDVLA EDLQVVLVET GSAQAGQGAP AAQQGGAPQL
QQLLPYAVLV AVAVAAVLLA LRLKRRGEGG VVLEEDEAIL DFLRRSGGRA YLKEIREALG
IPSTTLLRRV RRLEKAGYLR LEKTPGGLLV ILKK