Gene Tpen_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1252 
Symbol 
ID4600418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1189318 
End bp1189761 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content60% 
IMG OID639774028 
ProductDNA polymerase beta subunit 
Protein accessionYP_920653 
Protein GI119720158 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAGAAG GTTTGTTGAA GGGTAGGAGA CCCTTCAGGG TGACGGAGGA GCTTAGGGAG 
GCCGTGAAGG GTAAAGTGAG GAAGGTCCTC GAACCTAGAG AAGAGGTAGC CCTGGCCCTG
ATATTCGGGA GCTTCGTCAG AGGGGGGTTC GCGAGGGACG TAGACCTCGC CGTTTACCTC
GCTAGGAGCG TGGACCTATA TGAGGCGGCC GAGTACTCTG AGCTCCTGGG CAGGGTTCTC
GAAAGGGAGA CCGGCCTACC TTTCGACGTG GTGGTACTCA ACGTGGCGGG AGAAGGGCTC
TTAGCGAGAG CCATGAGGGG GGAGAAAGTA CTCGTAAGGG ACCAGTTGCT CTACCACGCC
CTCAGGATGC TGGTAGCAGA GGCTGCCCGC TTCACGGGGA TGACAGTACC TAGGGCCGGC
TCTAAGCCCT CCCACGACGG CTAG
 
Protein sequence
MSEGLLKGRR PFRVTEELRE AVKGKVRKVL EPREEVALAL IFGSFVRGGF ARDVDLAVYL 
ARSVDLYEAA EYSELLGRVL ERETGLPFDV VVLNVAGEGL LARAMRGEKV LVRDQLLYHA
LRMLVAEAAR FTGMTVPRAG SKPSHDG