| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1227 |
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| Symbol | rbcL |
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| ID | 4601724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1164846 |
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| End bp | 1166177 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639774003 |
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| Product | ribulose bisophosphate carboxylase |
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| Protein accession | YP_920628 |
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| Protein GI | 119720133 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
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| TIGRFAM ID | [TIGR03326] ribulose bisphosphate carboxylase, type III |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGGAAG AGTTTGAACC TTACGGCGAA TTTGTGGTCA AGAGCTACCT GCCGGATCCC
GATAAAGACG TCATTGTCAC ATTTAGGGTT ACTCCGAGCG AGGGCTTCAC AATAGAGGAC
GCAGCGGGAG GCGTAGCCGC GGAGAGCAGC GTCGGCACGT GGACTACCCT GTACCAGTGG
TACGATAAGA GCAGGATCGA CAGGCTCAAG GGGAAGGCTT ACTACATGGA GAGCCTGGGC
GACGGGTCAT ACATCCTCCG GGTCGCGTAC CCCGTCGAGC TGTTCGAAGA GGGGAACATG
CCGGCCTTCC TGGCGTCCGT TGCCGGCAAC ATTTTCGGCA TGAGGAGGGT CCGCTCCCTG
AGGGTTGAGG ACATATACTT GCCCGAAGCC TTCCTGAAGC ACTTCAAGGG CCCCTCGCAG
GGCGTCGAGG GTGTACGCGG GAAGCTGAAG ATCTGGGGGA GGCCCATAAT AGGCACCGTG
CCGAAGCCGA AGGTCGGGTA CTCCCCCGAG GAGGTCGAGA AGCTGGCCTA CGAGATACTG
GTCGGGGGCA TGGACTTCGT GAAGGACGAC GAGAACCTGG CGGGCCCGAG CTACTGCAGG
TTCGAGGAGA GGGCTAAGGC GATAATGAAG GCGATAGACA GGGCCGAAAA GGAGACGGGC
GAGAGGAAGG CCTGGCTCGC CAACATAACG GCGGACGTCA GGGAGATGGA GCGCAGGCTT
AAGCTTGTAG CGGAGCTCGG CAACACGCAC GTCATGGTCG ACGTGGTGAT AGCGGGCTGG
TCCTCCCTGA CGTACGTAAG GGATCTAGCC GCGGACTACA AGCTGGCGAT ACACGGGCAC
AGGGCTTTCC ACGCCGCCTT CACCCGGAAC CCCTACCACG GTGTATCGAT GTTCACCCTC
GCGAAGCTGT ACAGGATAAT CGGCGTCGAC CAGCTACACG TAGGGACACC GGAGGTCGGC
AAGCTGGAGG CGAAAGCCGT AGACGTGATC AGGATGGCGC GCCTACTCAG GGAGCAGACG
TACAAGCCAG ACATTGAGGA CGGGCTCCAC ATGCAGCAAC CATTCCCCGG GATAAAGCCG
GCTTTCCCCG TCTCCAGCGG AGGCCTCCAC CCGGGCACGC TACCCGCTGT CATCAAGGCT
ATGGGCGTAG ACACCGTCAT CCAGGTTGGA GGGGGCGTTG TAGGGCACCC CGACGGACCG
AGGGCGGGCG CCGCCGCGGC TAGGCAGGCT GTAGAAGCGT ACCTCGAGGG AGTCCCGCTA
CAGGAGTACG CGAAGACGCA CAGAGAGCTT GCAAGAGCCC TCGAGAAATG GGGGCAAGTG
ATACCCGTCT AG
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| Protein sequence | MPEEFEPYGE FVVKSYLPDP DKDVIVTFRV TPSEGFTIED AAGGVAAESS VGTWTTLYQW
YDKSRIDRLK GKAYYMESLG DGSYILRVAY PVELFEEGNM PAFLASVAGN IFGMRRVRSL
RVEDIYLPEA FLKHFKGPSQ GVEGVRGKLK IWGRPIIGTV PKPKVGYSPE EVEKLAYEIL
VGGMDFVKDD ENLAGPSYCR FEERAKAIMK AIDRAEKETG ERKAWLANIT ADVREMERRL
KLVAELGNTH VMVDVVIAGW SSLTYVRDLA ADYKLAIHGH RAFHAAFTRN PYHGVSMFTL
AKLYRIIGVD QLHVGTPEVG KLEAKAVDVI RMARLLREQT YKPDIEDGLH MQQPFPGIKP
AFPVSSGGLH PGTLPAVIKA MGVDTVIQVG GGVVGHPDGP RAGAAAARQA VEAYLEGVPL
QEYAKTHREL ARALEKWGQV IPV
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