Gene Tpen_1137 details

Gene Information

• Locus tag: Tpen_1137
• ID: 4601392
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 1074966
• End bp: 1075748
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 639773913
• Product: ABC-2 type transporter
• Protein accession: YP_920538
• Protein GI: 119720043

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.18489
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGGCGG GAGACGTCGC GAGGATCTTC AAGGCGGGCG TACTCTTCGA GGTCTCAATG 
CTCAAGTCCA ACAAGGGGTA CTTTGCCGCC ACCCTTGCCC GCCCCTACTT CGTCTACGCG 
CTCCTCCTCT TGATATCGAA GCAGCTCGGC GCGGGCTACA CGCCTAGAGA CGTCGTGGTG 
CAGACCCTCG CCGTCACCGG CTCCATAGAC GTCCTCTGGG ACGTCGCCGG GCAGGGAATA 
CTGCTAAGGG TCTCCGGGGT CCTACCGTAC TACACCCTGT CGCCGGGAGG AGTACTCCTC 
GCGCTCGTCG TGAGCTACCT CCCGAGGTAC ATCCTCGAAA CTCTCCTCAA AGCCGTAGCG 
TTCCTGCCTG TCCTCGCGCT CGAAGAGGGG CCCGCGGACG CGCTTTTACA CCTCCTCGCG 
GCCTACGCGC TCCTCCTCCT AGGATTGCTC CCGCTACTGG GCATAAGCAC GCTGGTCGCC 
GGGGCGACGC TCCTGGTACA CGAAGAGTCC CCCGTGCTCG AGTGGGTTAC GCCGCTCGTC 
CTGCTCCTCT CCGGGGCGGT GTACCCGGTG AGCGTACTGC CGGGGTGGAT GCGGGCGCTC 
TCCGCTCTCA TACCTGTGAC CTACGTCGTG GAGCTCTCTA GGGCCCTAGA GGGGGGCGGG 
GGAGTCCAGG CTTTCTACAG CGGGGCTTTC GCGCTACTGA TATCCCTCTC CATACTCTAC 
AACGCCGCTG CCAGCAGGCT GTTCAGGAAG GCCGAGGAGG CCCTGCTAAG GAAGGGTGTC 
TAG 

 

Protein sequence

MKAGDVARIF KAGVLFEVSM LKSNKGYFAA TLARPYFVYA LLLLISKQLG AGYTPRDVVV 
QTLAVTGSID VLWDVAGQGI LLRVSGVLPY YTLSPGGVLL ALVVSYLPRY ILETLLKAVA 
FLPVLALEEG PADALLHLLA AYALLLLGLL PLLGISTLVA GATLLVHEES PVLEWVTPLV 
LLLSGAVYPV SVLPGWMRAL SALIPVTYVV ELSRALEGGG GVQAFYSGAF ALLISLSILY 
NAAASRLFRK AEEALLRKGV