Gene Tpen_1104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1104 
Symbol 
ID4601098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1041651 
End bp1042475 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content59% 
IMG OID639773881 
Productcobalt transport protein 
Protein accessionYP_920506 
Protein GI119720011 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACGA TACTCGGAGA GTTGACGGGC TTCGAAGCGG AGAGCAAGCT GTACATGGGG 
CTAAGCCCCC TCGTTAAAAT AGTGGTTCCT CTTTCTTTCT CCCTCGACGT GCTCCTAGTG
AAGGACGTTC CATCGGCTGC GGCGCTGACC CTGGCTGTCT TTCTAGTTGT TCTGGCGGTA
AAGGTTCCCT TGAGGGTCGT GAAGGGCTTC CTAGTCCTCA TCGCAAGCCT AAGCGCTTTC
ATAGTTCTGA GCTTAACCCT CTTTACGAGC CTCCCGGGCA GGGTTCTCTT CGAGTACACG
TTACTCTCAG TGAAGGCCGA GAAGGGGGTC CTCGCCTGGA GAATAGTAGT CACGGACGAG
GCCCTTTCGA GGTCCTTCTT CTTCGTTCTC CGCATACTGG CGATGATACT CACGGCTACA
CTCTTCGTAG CTACGGTTAG CGACAGGGAC GTTGTACGAG CCTTGAGGGG GCTCCGCCTC
CCGCTGGGCG TCGCGGTCGC GGCTTCCCTC TTCTTCAGGG GGATAAGCAT GTTCCTGGAC
GACTTCAGGG TGATCAGGGA GGCTATGATG GCGCGCGGCG TGGACTTCGA GAAGACGAGC
CTTTACAGGA GGTTTTTCCT CTACGTCAAC GCGCTCATCC CGCTGATATC ACTCATGGTC
AGCAGGAGCT ACGAAGTCTC GCTGGCCCTC GAGTCGAAGG GATTATCGCC GCTGAGCGGC
CCACGCGGCG GCTACGCGTT CGCGCTTACC CGGGCTGACC GCCTAGTCCT AGGGCTCGCC
GCACTGCAGT TCGCATTACT GGCGGCGTGG TGGGTATGCG CGTAG
 
Protein sequence
MPTILGELTG FEAESKLYMG LSPLVKIVVP LSFSLDVLLV KDVPSAAALT LAVFLVVLAV 
KVPLRVVKGF LVLIASLSAF IVLSLTLFTS LPGRVLFEYT LLSVKAEKGV LAWRIVVTDE
ALSRSFFFVL RILAMILTAT LFVATVSDRD VVRALRGLRL PLGVAVAASL FFRGISMFLD
DFRVIREAMM ARGVDFEKTS LYRRFFLYVN ALIPLISLMV SRSYEVSLAL ESKGLSPLSG
PRGGYAFALT RADRLVLGLA ALQFALLAAW WVCA