Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1090 |
Symbol | |
ID | 4602130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 1027425 |
End bp | 1028168 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639773867 |
Product | hypothetical protein |
Protein accession | YP_920492 |
Protein GI | 119719997 |
COG category | [R] General function prediction only |
COG ID | [COG4821] Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.532111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCAGG ACGTCTACAC CGAGTTTTAC AGGGGCGTTG TAGGCATATT CGACAGGATT CTCCGGGAGG AAAAGCTCAA CCTCGAAAAG GCTTCCGAGG TCCTCGCCCA TACCTTGAAG AGCGGCGGCT TCATCTACGT GTTCGGGACC GGGCACTCCA TGCTGATGGC CATGGAGGTG TTCTACAGGG CTGGAGGGCT TGTACGCGTC TACCCCCTCC TCGACCTAAG CGTCTCCGGC TTTAACGGCG CGCTTAAGAG CACGTACATG GAGAGGTTGC CCGGCTACGC GAAGGCGCTC CTCGACTCCA CGCCTATAAA GCCGAACTCC TCGCTGATAA TTGTGAGCAA CTCCGGGAAG AACGCTGTTC CCGTCGAGAT GGCGGTAGAG GCGAGGAACA GGGGAGTCAA GGTCATAGCT ATAACCTCCG TGGAGTACAG CAGGAAGGTG CCTCCGAGCA ACCCCCTCGG GAAGAGGCTC TACGAGGTAG CCGACGTCGT TATAGACAAC AAGGTCCCCG AGGGCGACGC GATCCTCAAG ATAGAGGGGT GCGAGCAAAA AGTGGCGCCC GTGTCTACGA TCGTGTGCTC CTTCATACTC CAGCTACTCG TAGCCAGGAC TGTGCAGAAA CTCCTCTCGG CGGGGGTGAA GCCCGAGGTC TGGATGAGCG CGAACGTGCC GGGAGGCGAC GAGGCGAACA AACGCTACCT AGAAAAGTAC TTCGAGTCCC TCAAGCCCCT GTAG
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Protein sequence | MVQDVYTEFY RGVVGIFDRI LREEKLNLEK ASEVLAHTLK SGGFIYVFGT GHSMLMAMEV FYRAGGLVRV YPLLDLSVSG FNGALKSTYM ERLPGYAKAL LDSTPIKPNS SLIIVSNSGK NAVPVEMAVE ARNRGVKVIA ITSVEYSRKV PPSNPLGKRL YEVADVVIDN KVPEGDAILK IEGCEQKVAP VSTIVCSFIL QLLVARTVQK LLSAGVKPEV WMSANVPGGD EANKRYLEKY FESLKPL
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