Gene Tpen_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1090 
Symbol 
ID4602130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1027425 
End bp1028168 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content58% 
IMG OID639773867 
Producthypothetical protein 
Protein accessionYP_920492 
Protein GI119719997 
COG category[R] General function prediction only 
COG ID[COG4821] Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.532111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCAGG ACGTCTACAC CGAGTTTTAC AGGGGCGTTG TAGGCATATT CGACAGGATT 
CTCCGGGAGG AAAAGCTCAA CCTCGAAAAG GCTTCCGAGG TCCTCGCCCA TACCTTGAAG
AGCGGCGGCT TCATCTACGT GTTCGGGACC GGGCACTCCA TGCTGATGGC CATGGAGGTG
TTCTACAGGG CTGGAGGGCT TGTACGCGTC TACCCCCTCC TCGACCTAAG CGTCTCCGGC
TTTAACGGCG CGCTTAAGAG CACGTACATG GAGAGGTTGC CCGGCTACGC GAAGGCGCTC
CTCGACTCCA CGCCTATAAA GCCGAACTCC TCGCTGATAA TTGTGAGCAA CTCCGGGAAG
AACGCTGTTC CCGTCGAGAT GGCGGTAGAG GCGAGGAACA GGGGAGTCAA GGTCATAGCT
ATAACCTCCG TGGAGTACAG CAGGAAGGTG CCTCCGAGCA ACCCCCTCGG GAAGAGGCTC
TACGAGGTAG CCGACGTCGT TATAGACAAC AAGGTCCCCG AGGGCGACGC GATCCTCAAG
ATAGAGGGGT GCGAGCAAAA AGTGGCGCCC GTGTCTACGA TCGTGTGCTC CTTCATACTC
CAGCTACTCG TAGCCAGGAC TGTGCAGAAA CTCCTCTCGG CGGGGGTGAA GCCCGAGGTC
TGGATGAGCG CGAACGTGCC GGGAGGCGAC GAGGCGAACA AACGCTACCT AGAAAAGTAC
TTCGAGTCCC TCAAGCCCCT GTAG
 
Protein sequence
MVQDVYTEFY RGVVGIFDRI LREEKLNLEK ASEVLAHTLK SGGFIYVFGT GHSMLMAMEV 
FYRAGGLVRV YPLLDLSVSG FNGALKSTYM ERLPGYAKAL LDSTPIKPNS SLIIVSNSGK
NAVPVEMAVE ARNRGVKVIA ITSVEYSRKV PPSNPLGKRL YEVADVVIDN KVPEGDAILK
IEGCEQKVAP VSTIVCSFIL QLLVARTVQK LLSAGVKPEV WMSANVPGGD EANKRYLEKY
FESLKPL