| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1010 |
|---|
| Symbol | |
|---|
| ID | 4600683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 955409 |
|---|
| End bp | 955972 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639773788 |
|---|
| Product | ATP-cone domain-containing protein |
|---|
| Protein accession | YP_920413 |
|---|
| Protein GI | 119719918 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.91095 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAAGA AGGTTGTGAA AAGGTCGGGG AAAGTCGAGG AGTTCGACAG GGAGAAGCTC
GTGCGCTCTA TGGTGAACGC GGGGGCTCCG GAGGAGGTCG CGGTCGAGAT CGCGAAGGAG
GTTGAGTCGA AGGTACGGGA CGGCGCCACG ACGGACGAGA TTAGGCGGTA TGTGCTCGCG
AGGCTGAAGG TGCTCGCGCC GCAGGCGTAC GAGGCTTGGA CGTTCTACGA CAGGGTTGCG
AAGGGGAGGA TAACGTTCGA GGATGGCAAG TACGTGGTCG TGTCGAAGGG GCACCTCTAC
CTGGGGCGCG AGGTCAAGGA CGTGGGTCCG AAGGGTCTAT CCTCCTCGGA GGAGGTCGAG
GGGATACTCA AGGAGCTTGA GGAGGACCTG GAGTACGGGG TCTCCAAGGC CACTATAAAC
GCGAGGCTCT ACGCCCTCTT CATGGGGGTC TTGAAGAGCA AGGCTATGCC CGTCGAGGAG
AAGGAGAAGT CCATCAAGCT GATAAACTCC TTCAGGGAGA AGCTGGGCTG GAAGCCCTAC
GAGCTGAAGA AGCCCCTCGC GTAG
|
|---|
| Protein sequence | MPKKVVKRSG KVEEFDREKL VRSMVNAGAP EEVAVEIAKE VESKVRDGAT TDEIRRYVLA
RLKVLAPQAY EAWTFYDRVA KGRITFEDGK YVVVSKGHLY LGREVKDVGP KGLSSSEEVE
GILKELEEDL EYGVSKATIN ARLYALFMGV LKSKAMPVEE KEKSIKLINS FREKLGWKPY
ELKKPLA
|
|---|
| |