Gene Tpen_1009 details

Gene Information

• Locus tag: Tpen_1009
• ID: 4600682
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 954943
• End bp: 955362
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 639773787
• Product: histidine triad (HIT) protein
• Protein accession: YP_920412
• Protein GI: 119719917
• COG category: [F] Nucleotide transport and metabolism; [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAGGACT GCGTGTTCTG CAGGATAGTG AGGGGGCAGC TCGACGCGCA CTTCGTCTAC 
GTGGGAGGCA GGGTCGTCGT GTTCCTGGAC AAGTACCCGG TGACTAGGGG CCATGCTCTC 
GTCGTCCCGA AGGACCACTA CAGGGACGTC TTCGACGCCC CTGGCGACGT CCTCTCGGAG 
ATGGTGTTCG TCGCGAAGGT TGTCGCGCTG GCGCAGAGGG AAGCCCTAGG GGCGAGGGGC 
GTTAGGCTGG TGATGAACAG CGGGAGGGAG GCGGGCCAGG AGATATTCCA CGCGCACATG 
CACGTCATAC CCTACGGCAC CGAGAGGATG GATAGGCGCC CGCTGACCCG CGCCGAGGGC 
GAGGCTGTCG CGGAAGCATT GAGGAAAGCC CTGGAACGCT TACTCGGGGC TTCTCGATAA 

 

Protein sequence

MEDCVFCRIV RGQLDAHFVY VGGRVVVFLD KYPVTRGHAL VVPKDHYRDV FDAPGDVLSE 
MVFVAKVVAL AQREALGARG VRLVMNSGRE AGQEIFHAHM HVIPYGTERM DRRPLTRAEG 
EAVAEALRKA LERLLGASR