| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0904 |
|---|
| Symbol | |
|---|
| ID | 4602227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 852807 |
|---|
| End bp | 853556 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639773683 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_920308 |
|---|
| Protein GI | 119719813 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGACG AGATCCTGGT GCTCGAGGAT ATAGAGGCGG GATACGAGGG TACGCCCGTC
ATCAGGGGTG TGTCGCTCTC CGTGAGGCGC GGCGAGAAAG TAGTCGTGAT GGGCCCCTCC
GGGAGCGGTA AGAGCACGCT ACTGAAGGTC GCAGTGCTGC TTGTAAAGCC CTGGAAGGGT
AGAGTGTGGC TGGACGGGGA GGAGCTTACG TCTGGGCGCG TGGACCTCAG GAAGGCAAGG
GCTAAGACGG GGTTCGTGTT CCAAAGCTAC AACCTGTTCC CCCACATGAA GGTGATAGAC
AACGTGGCAT TACCGCTCAG GATCGTTAAG GGCTACGATA AGGCTAGGGC TCGGGAAAAG
GCCGCCTCGC TACTCAGGCA AGTAGGGCTG GCGGGCTTCG AGGAGAAGTA CCCCTTACAG
CTCAGCGGCG GGCAGCAACA AAGGGTGGCT ATAGCGAGGG CGCTCGCGAT GGACCCGGTG
ATCCTCTTCC TAGACGAGCC GACGTCCGCT CTAGACCCGG AGTTGAAGGG CGAGGTTCTC
GACGTGCTCC TCGAAGTAGC GAAGCAGGGT ATCGCTATGC TCGCCGTGAC GCATGAGCTG
GACTTTGCCC GGGAGGCGGC GGACAGGATA GTCATCATGG AGCACGGTAG GATAATAGAG
GAGGGGCCCG CTCAACAGAT TCTCGACTCC CCCTCCACTC CAAGGGTCAA GGAGTTCCTA
CGGCTGGTAA GGAGGACAGA AGCGACCTGA
|
|---|
| Protein sequence | MRDEILVLED IEAGYEGTPV IRGVSLSVRR GEKVVVMGPS GSGKSTLLKV AVLLVKPWKG
RVWLDGEELT SGRVDLRKAR AKTGFVFQSY NLFPHMKVID NVALPLRIVK GYDKARAREK
AASLLRQVGL AGFEEKYPLQ LSGGQQQRVA IARALAMDPV ILFLDEPTSA LDPELKGEVL
DVLLEVAKQG IAMLAVTHEL DFAREAADRI VIMEHGRIIE EGPAQQILDS PSTPRVKEFL
RLVRRTEAT
|
|---|
| |