| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0852 |
|---|
| Symbol | |
|---|
| ID | 4601977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 801452 |
|---|
| End bp | 803299 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639773630 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_920256 |
|---|
| Protein GI | 119719761 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
|---|
| TIGRFAM ID | [TIGR00153] conserved hypothetical protein TIGR00153 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGGTCCC TGAGACGCGA GAGCATCGCG ATGGCTCTAG TACTCTTAAC TGAGATACTC
GTCGGGCTAG CTACAGGCGT GCAGCGAACC ATACTTGGTG TGGCTTCGCA CGCAGCTGGC
GGGTCTTTCC TTCTGCCCAT AGTCTCGTTC GGCGCCTTCA AGGCTACGTT CGACCTGTTC
ACGGGGCTGT ACGCGGGGAA GAGTAGGCGT AAGTCCCTGC TGACGGGAAC GCTGGTATAC
ACTACGGGTG CGGTAGCCCT ATTGCTACTC CCTCCCCCGC TTAACTTCCT GGTAGGCAAC
ATCTTCGTGG GAGCCGGCGA GGGGCTCGTC TTCGCTACCA GTGCGCTCGC AATCCGGGAC
ATTCTGGGGC TCGAGCGTTC ATCGCTCAGC TTCGGATACA TCGAGAGCGC GTGCTACTTC
GGTTACTCTA TCGGAGCGTT CGTTAGCGGG CTTGTCTACG GCTCCCTAGG GGCACCTGCG
ACGCTGTTCG TGATTCTCGC TTCCTCTGTT CTAGGCGTGG TCTCGGCTGC CAGCTCGCAT
GAAACTATGC AGTACACGCT GCAGGAGCGG GAGCGCTTCT CGACGACGAT GAAGACGTCG
GAGATCGTGA AGCTACTCTT CTCGAACCCT AGCACGGCGT CAGCCCTTCT CGCGGCGCAT
ATGGCGAAGG TAGCTGATAG CATTGCATGG GGTGTTATCC CGGTCTACAT GGTCGCCAAG
GGTCTCCAGG TGTATCACGT AGGCTTCGCG CAGTCCCTGT TGCTACTCGT GTGGTCCTCT
ACTATGCCCT TCTGGAGTTC GTTCTCGGAT AGGGTCGGCA GGCGCGCGCT GGCAACCCTT
GGGTTGATGA TCAACGGCGC CCTCTTGATA GCCTTGCCGG GCACGCGTAA CTTCCCAGAG
ATGCTGCTCA TAGTCCTGGT CATGGGTTTA AGCTACGCTA TGTACTACCC GATACTGCCT
GCACCCGTGG CAGACATGAC GCCCCCGGAA GGGCGGGACC TAGCGGTAGG GGTTTACCGC
GCGTTAAGGG ATTCGGGCTA CGCCACTGGA GCGCTTATCG CCACGCTTAT ACTCTCGGTT
GCGCCCAGCT CCCTGGATAG CGTCTTCATA GATATCGGGA GTATGCTGGT AGTAACGGCA
GCAGCCTTCT CCATCGTCTT CAGGGAAACG AGACCTACGT GGCCCTTCCT TAACCTCGTC
ATAAGGCACG TTGAGATAAT AAGGGACGTG CTTGTGTACC AGCAGAAACT CGTGGAGAAA
GCTTTCGGCG GCTACGCAGA GGAGTTGGAG TCGGGGATAC GCGTGTTAAA GGATATGGAG
AGGAAGGCAG ACGCCGTGAA GAGGGAAGTC ACCTGGAGGA TTTACTCGGG GTTGCTACCC
ACATCCAGCA GAATAGACTT CGAGAGGCTC GTCGAGGAAA TCGACAAGGT CGCCGGCGCG
GTTATAGAGT GCAACGAGAG GCTTCTATGG GTGAAGCACA GCGAAAAACT CCGGGACTTG
AAGCAACTCC TGCTGGAAAT GTTGAACGAG AACATCAGGC TGGCGGACAT GCTCATAGAA
AACCTGCGCG TGCTCAGCCT ATCCCCACTC TACGCGGTGC GCGCTTCGAT CGAGATAGAC
GCGGGAGAGA GGAGGGTCGA CGAGTTAAGG ATAAAGGCAA TACACATGAT TAGAAAGCTC
TTGGACGAAA ACGAGATCGA CATCATGTCG GCGCTGAGCC TCATGGAAGC TGTAAACCTG
CTAGAGCTAA CGAGCGACGA CTTCCAGGAC GCCGCCGACA TCATCAGGAT AATCAGCTAC
CGGCACGCCG CCCTACCTCC CGATAGAATC GCGCGGTTCG GCGCCTAG
|
|---|
| Protein sequence | MGSLRRESIA MALVLLTEIL VGLATGVQRT ILGVASHAAG GSFLLPIVSF GAFKATFDLF
TGLYAGKSRR KSLLTGTLVY TTGAVALLLL PPPLNFLVGN IFVGAGEGLV FATSALAIRD
ILGLERSSLS FGYIESACYF GYSIGAFVSG LVYGSLGAPA TLFVILASSV LGVVSAASSH
ETMQYTLQER ERFSTTMKTS EIVKLLFSNP STASALLAAH MAKVADSIAW GVIPVYMVAK
GLQVYHVGFA QSLLLLVWSS TMPFWSSFSD RVGRRALATL GLMINGALLI ALPGTRNFPE
MLLIVLVMGL SYAMYYPILP APVADMTPPE GRDLAVGVYR ALRDSGYATG ALIATLILSV
APSSLDSVFI DIGSMLVVTA AAFSIVFRET RPTWPFLNLV IRHVEIIRDV LVYQQKLVEK
AFGGYAEELE SGIRVLKDME RKADAVKREV TWRIYSGLLP TSSRIDFERL VEEIDKVAGA
VIECNERLLW VKHSEKLRDL KQLLLEMLNE NIRLADMLIE NLRVLSLSPL YAVRASIEID
AGERRVDELR IKAIHMIRKL LDENEIDIMS ALSLMEAVNL LELTSDDFQD AADIIRIISY
RHAALPPDRI ARFGA
|
|---|
| |