| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0839 |
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| Symbol | |
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| ID | 4601548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 789356 |
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| End bp | 790315 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639773616 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_920243 |
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| Protein GI | 119719748 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.276132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAGGC GAAAATACAC GATTCGCATG TTCGCAGTTT CTCTCAGAAA GAGAGGCGTA
GACGCCGTGT ACTCTTTCCC CTGGAAAGTT AGTATCGTTG CGTTTATGGC CAACCCGCCC
GTACTTAAGG AGGATATTCA GGCCTTAAAG GAGACATTCT CCACTCTCTC CTCGGACAGG
TTCTTCGACG TGATAGAGGT TCAGCTCCTC GGCGACGAGG CTTGGAGGGC TGTTGAGGGG
TTTGTGAAGG CAAGCGGCGT GGAGGTTGCG AGCGGGGTCC AACCCCTCGT ATTGATGCAG
GGCTTTAACC CCTCTTCCCT CGTGGAAGCT GAGAGAAAGA AAGCTGTAAG CAAGCTCGTC
GAAGTAGTGA AGACCTCGGC AGAGAGGGGT ATAAGCAAGG TTGCATTTTC CAGCGGGCCG
GACCCGGGCC CCGAGAACCG CGAAGCAGCC AAGGACGCCC TGATTAAGAG CTTGAAGGAG
ATAGCGGGCG AGGCGAAGAA GTTCGGGGTA ACAGTCATAC TGGAGACCTT CGACAGGGAC
TGGGACAAAA AGCAACTCAT AGGGCCTATC AGGGAGGCGG TAGAAGTGGC AGAGAGCGTA
AGGGAGGAGC ACGGAAACTT CGGCCTGCTC TGGGATCTGA GCCACGCCCC CATGCTCGGC
GAGAAGCCCT CCGACCTCAA GTTAGCGAAG AGCTACCTGG CGCATATCCA CATAGGGTGC
GCTAAGCGCC TACCCGACGG GCGGCTAGTG GACTGGCACC CGGGCTTTTA CAGGCCCGGA
GCAGTCAATG GGGTCGAAGA CGTGAAGGAG CTCCTCAAAG TACTGCTCGA GATAGGGTAC
ACAGGGGCCG TGGGCTTCGA AGTAAAGCCG GAGGAAGGTC AGCACTGGCG CGAACCCGTG
GAGGCCGCGA AGGGCGTGCT CTACGAGGCA TTCCTCAGGC TCGTTGAGAG CGAGCTCTAA
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| Protein sequence | MPRRKYTIRM FAVSLRKRGV DAVYSFPWKV SIVAFMANPP VLKEDIQALK ETFSTLSSDR
FFDVIEVQLL GDEAWRAVEG FVKASGVEVA SGVQPLVLMQ GFNPSSLVEA ERKKAVSKLV
EVVKTSAERG ISKVAFSSGP DPGPENREAA KDALIKSLKE IAGEAKKFGV TVILETFDRD
WDKKQLIGPI REAVEVAESV REEHGNFGLL WDLSHAPMLG EKPSDLKLAK SYLAHIHIGC
AKRLPDGRLV DWHPGFYRPG AVNGVEDVKE LLKVLLEIGY TGAVGFEVKP EEGQHWREPV
EAAKGVLYEA FLRLVESEL
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