| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0823 |
|---|
| Symbol | |
|---|
| ID | 4601826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 776372 |
|---|
| End bp | 777391 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639773600 |
|---|
| Product | glyoxylate reductase |
|---|
| Protein accession | YP_920227 |
|---|
| Protein GI | 119719732 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAGAC CAAAGGTCTA CGTTACAAGG ATAATACCCG AGCCTGGCTT ATCTATGCTC
AAAGAGTGTT GCGACGTAGT TGTTCACGAG TCGAAGGATT GGCCTCCTTC TAGGGAAGAG
CTTCTAAGGA ACATTCGCGA CAAGGACGCC CTTCTATGTC TCCTGACAGA CAAGATAGAC
GCAGAAGTCA TGGACGCAGC GCCCAACCTA AAGGTCATTA GTACGTACTC CGTCGGGTTC
GACCACATAG ATATACCCGA GGCCACGAAG AGAGGAATCT ACGTTACGCA CACGCCGGGA
GTTCTAACAG ACGCTGTCGC CGAGTTCACG GTCGGCCTGA TACTGGCCGT GACTAGGAGG
ATCGTGGAGG CCGACAAGAT AATCCGCACA GGGCAGTGGG ACAAGCCCTG GAACCCCTAC
TTCCTGACGG GCCCGGAGCT GAAGGGGAAG ACTATCGGGC TAGTAGGGCT GGGGCGCATA
GGGGTAGCTA CAGCCAAGAG GTTATCCAGC TTCGACGTGA AGATACTGTA CTACGACATC
GAGCGCAGGT GGGACGTTGA AACCGTGATA CCGAACATGG AGTTCACGGA CCTGGACACG
CTCCTCGAGA AGTCCGACAT AGTGTCTATC CACGTTCCCT TGACTAAGGA GACCTATCAC
CTCATAAACG AGGAGAGGCT TAGGAAGATG AAGAAGACAG CCTACCTCAT TAACACGGCG
AGGGGACCCG TGGTCGACAC GGAGGCCTTG GTTAAAGCCT TGAAGGAGGG CTGGATAGCT
GGGGCGGCGC TGGACGTCTT CGAGCAGGAA CCGCTCCCGC CGAACCATCC CTTGACGAAG
TTCGACAACG TAGTCCTGGC GCCGCACATA GCTAGCGCAA CGATAGAGGC TAGGCAGCGC
ATGGCGGAGC TGGCCGCAAG GAACCTTATA GCAGTGTTAA AGGGAGAAAT GCCGCCGGCA
CTCGTGAACA AAGAGGTGCT CAAAGTCAGA CCTTTAGAGA AAGTGAAGAT GATCCCGTAA
|
|---|
| Protein sequence | MARPKVYVTR IIPEPGLSML KECCDVVVHE SKDWPPSREE LLRNIRDKDA LLCLLTDKID
AEVMDAAPNL KVISTYSVGF DHIDIPEATK RGIYVTHTPG VLTDAVAEFT VGLILAVTRR
IVEADKIIRT GQWDKPWNPY FLTGPELKGK TIGLVGLGRI GVATAKRLSS FDVKILYYDI
ERRWDVETVI PNMEFTDLDT LLEKSDIVSI HVPLTKETYH LINEERLRKM KKTAYLINTA
RGPVVDTEAL VKALKEGWIA GAALDVFEQE PLPPNHPLTK FDNVVLAPHI ASATIEARQR
MAELAARNLI AVLKGEMPPA LVNKEVLKVR PLEKVKMIP
|
|---|
| |