| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0778 |
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| Symbol | |
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| ID | 4601839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 728202 |
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| End bp | 729701 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639773554 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_920183 |
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| Protein GI | 119719688 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.674672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTCGAG TGAAGATAGC GTTCGTTAAC GCCTTCGTAC CCTGGAGTCC CGGCTCGGAC
TCCGTGGTTT ACTCGCCTTC TTCCGGCATA GTCTTCGTCG GGAGCGAGAG CGCGGCCCTG
AAGACAGGGG CGGACCTCGT CGTGGACGTC GAGGGTAGAG TCGTGGTGCC GGGGCTCGTG
GACGCGCACA TGCACCTGTA CTCCACCGCG TTGAGCCTCG GTAGGTTGGA CCTCAGGGGC
GTCAGCTCCT TGGAGGAAAT CAGAGAGGTC TTGAAGGCAG CGGTAAAGGA GGCTCCTCCC
GGTTCGTGGA TAGTCGGTAG GGGGTGGGAC CAGGAGAAGT TGAAGGAGAG GAGGATGCCT
ACCCGCTTTG ACATTGACGA CGTGACCGGG GACAACCCGG TCGTCCTTAT ACGCGTCTGT
GGACACGTAG CCCTCCTCAA CACTCTCGCC TTGAGGAAGA TGGGCCTCCT CGACAGCGAG
AGAGGCTTCG GCGCCCTGCT GGAGAAGGAG GGGGGCGTGC CCACGGGGAT AGTCTACGAG
GACCTCGTAG ACTACGTGGT GTCGAGGATC CCGCCGCCCC CGCCTGAGCT CCTAAAGTCG
TGGATACTGA GAGTACTCTC GGAGTACGTG TCCCTAGGTG TAACCGAGCT TCACTCGATG
TCCGTCAGCC TGGAAGAGCT CGAAGCCGTC CAGAGGGTGC TGACAACGCT TCCCATCGGG
TACCGGGCAT ACGTGGATCC GGGTATCGCG GAGCTCGCCG CTAGGGAGTA CAAAGGACTC
GTACACGGGG TGAAGATATT CGCTGACGGT AGCTTCGGGG CTAGAACCGC CGCTCTACGC
GAGAAGTACT CCGACGCCGA GACGAGGGGG GTGCTCCGCA TCTCGTCGGA GGGTATCCTC
TCAGTGGCCA GGAGGGCGTT GTCCCTCGGG CTGCAGACAG CCGTGCATGC CATCGGAGAC
CTCGCTGTAG CGGAGGCGCT TAAAGCCGCT GAGCAACTCC CGCGGGGCTC CTTGAGGATA
GAGCACGCTT CTTTGACTCC GCCAGACATC CTGGAAAAGA TAGGGGCGGT GAAACCCGAG
ATAGCGGTGC AACCGCACTT CATCCTGAGC GATACGTGGA TAACTGAGAG GCTCGGAGAG
AGGGCGGAGT GGGTCTATGC GTTCAAGTCG CTCCAAGCCC GTACGCGCGT TTACGGCTCC
TCGGATGCAC CGGTCGAGCC GATTAACCCC TGGCTCGGCG TCTACGCCGC CGTGGAGAGA
GGGTGCCCCG AGGGGCTACC CGTATGCCGC TACACTTACG GGGAGAAGAT GAGCTTCGTG
GAGGCTCTCA GGCTCTACAC ATCGTACGAT CAACGGAGAC CTTCGATCGT CGTGCTCAAC
TCTACGAGGC TCCCGACGTC GAAGAAGGAG TACGAAGCTC TGAGGGCGTA CGCGGTGCTA
GTAGGAGGGA AAACGGTGTA CAGAGCACCA GGAGCCCGCG TACCCGACCT TCTCGCATAA
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| Protein sequence | MVRVKIAFVN AFVPWSPGSD SVVYSPSSGI VFVGSESAAL KTGADLVVDV EGRVVVPGLV
DAHMHLYSTA LSLGRLDLRG VSSLEEIREV LKAAVKEAPP GSWIVGRGWD QEKLKERRMP
TRFDIDDVTG DNPVVLIRVC GHVALLNTLA LRKMGLLDSE RGFGALLEKE GGVPTGIVYE
DLVDYVVSRI PPPPPELLKS WILRVLSEYV SLGVTELHSM SVSLEELEAV QRVLTTLPIG
YRAYVDPGIA ELAAREYKGL VHGVKIFADG SFGARTAALR EKYSDAETRG VLRISSEGIL
SVARRALSLG LQTAVHAIGD LAVAEALKAA EQLPRGSLRI EHASLTPPDI LEKIGAVKPE
IAVQPHFILS DTWITERLGE RAEWVYAFKS LQARTRVYGS SDAPVEPINP WLGVYAAVER
GCPEGLPVCR YTYGEKMSFV EALRLYTSYD QRRPSIVVLN STRLPTSKKE YEALRAYAVL
VGGKTVYRAP GARVPDLLA
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