Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0750 |
Symbol | |
ID | 4600401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 701123 |
End bp | 702928 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639773526 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_920155 |
Protein GI | 119719660 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGCGG CGGGAGACCT TCCCTACTCG GTCTTAGCGG ATTTCTACGA GAGGATAGAG TCCACGTCTA GCCGCCTGGC GATGACAGAC TACCTGGTGG CGCTCTTCAA GAAGACCCCG CCCGAGGTAA TAGACAAGGT TGTATATCTG ACTCAGGGCC AGCTGAGGCC CGACTACGAG GGCGTCGAGC TGGGGGTCGC TGAGAAGCTC GCCCTGAGGG CTCTCGCTAA GGCTTCGGGC AGGCACCTGA AGGACGTGGA GGATCTATAC AAGAAGACGG GCGACATAGG AGCGGTGGCC GAGAAGCTTC TCACCGCCCC GGGCGGCGGG CTTCTGGAGT TCTTCGGGAC CCCTGTCCAG AAGAAGGAGC TGACGGTCTC TCAGGTGTAC AGCGCGCTCA TGAAGATAGC CCAGGCGTCC GGTGAGGGCG CCCAGGAGAC CAAGGTCAAC ACGCTCGTAG CCTTGCTTCA GGACGCTAAG CCGAAGGAAG CCCGCTACAT CCTGAGGACT GTGCTTGGGA GGCTCCGCCT CGGCATAGCC GACATGACGA TACTCGACGC GCTCGCAGCG GCTTTCGCGG GCTCTAAGGC TGCGAGGGAC GTAATCGAGA GGGCTTACAC GAAGCACCCG GACCTCGGCT ACATCGCGAA GTTGCTGGCC ACGAAGGGCC TCGACGCCGT GGCGTCGCTG AAGATAGAGG TGGGGATCCC GGTTCTCCCA ATGCTGGCCG AGAGGCTGAG CGACCCCGCG GAGATACTCG AGAAGCTGGG CGGGAAGTGC CTCGCGGAGT ACAAGTACGA CGGGGAGAGG GTTCAGGCTC ACAAGAGCGG GGACAAGGTC CTGCTGTTCA GCAGGAGGCT GGAGAACATC ACCCACCACT ACCCGGACGT CGTGGAGTAC GTGAAGAGGC TGAAGGTGCG CGAGGCGATA GTGGAGGGGG AGATAGTCGC CTACAACCCG GACACCGGAG AGATGCTCCC ATTCCAGGAG CTCATGCACA GGAGGCGTAA GTACGACGTG GAGAAAGCGA TGAAGGAGTA CCCGGTGAGG GTCTACCTCT TCGACGTGAT ATACATGGAC GGCGAGGAGC TGATCGAGAA GCCGCTGGAC CAGAGGAGGC TCATCCTCGA GAAGATAGTC CCGGAGGGCG ACGAGGACAT CCTGCTGAGC ACGGCGAAGG TCGTCGGCGA CGCGAAGGAC CTGCTACACT TCTTCGAGCA GGCGATAAGC GAGGGCTGCG AGGGGGTTAT GTGCAAGTCG ATAGGCCCCG GCAGCATATA CCAGATGGGC GCCAGGGGCT GGCTGTGGAT AAAGTTCAAG AGGGACTACA GGATGGAGAT GACCGACACC GTCGACCTCG TCGTGGTGGG CGGCTTCCAC GGCAGGGGCA AGCGTGCGGG CACATACGGC GCGCTCCTCA TGGCCGCCTA TGACCCGGAG ACGGATACCT TCAAGACCGT CTGCAAGGTA GGCACCGGCT TCACGGACGA GGATCTCGCG AAGCTCCCGG AGCTCCTCGA CCCCTACAAG ATACCGCACA GGCACCCCAG GGTTTTCTCC AAGATAGAGG CGGACGTCTG GTTCGTGCCG GCGGTCGTGC TCGAAATCAT AGGCGCCGAG ATCACGCTCA GCCCGCTCCA CACGTGTGCT CTCAACAAGC TGGAGGAGGG CGCGGGGCTG GCTATACGCT TCCCGAGGTT CACTGGGAGG TATAGGTTCG ACAAGAAGCC GGAGCAGGCA ACCACTGAGA GCGAGCTCAT CGAGATGTAC AAGTCTCAGA AGAAGACCGC CCTGCAGCAG TCCTAA
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Protein sequence | MGAAGDLPYS VLADFYERIE STSSRLAMTD YLVALFKKTP PEVIDKVVYL TQGQLRPDYE GVELGVAEKL ALRALAKASG RHLKDVEDLY KKTGDIGAVA EKLLTAPGGG LLEFFGTPVQ KKELTVSQVY SALMKIAQAS GEGAQETKVN TLVALLQDAK PKEARYILRT VLGRLRLGIA DMTILDALAA AFAGSKAARD VIERAYTKHP DLGYIAKLLA TKGLDAVASL KIEVGIPVLP MLAERLSDPA EILEKLGGKC LAEYKYDGER VQAHKSGDKV LLFSRRLENI THHYPDVVEY VKRLKVREAI VEGEIVAYNP DTGEMLPFQE LMHRRRKYDV EKAMKEYPVR VYLFDVIYMD GEELIEKPLD QRRLILEKIV PEGDEDILLS TAKVVGDAKD LLHFFEQAIS EGCEGVMCKS IGPGSIYQMG ARGWLWIKFK RDYRMEMTDT VDLVVVGGFH GRGKRAGTYG ALLMAAYDPE TDTFKTVCKV GTGFTDEDLA KLPELLDPYK IPHRHPRVFS KIEADVWFVP AVVLEIIGAE ITLSPLHTCA LNKLEEGAGL AIRFPRFTGR YRFDKKPEQA TTESELIEMY KSQKKTALQQ S
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