| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0727 |
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| Symbol | |
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| ID | 4600847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 676434 |
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| End bp | 677612 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639773503 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_920132 |
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| Protein GI | 119719637 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGCTTC CAAGGCTCTT CAGGGGGAAC GCGAAGCGCG AAGAGGAGCT TGTAAGCGTA
AGTGAAGCTC TGCCGCCGGA CGCCAGGCTG GTAGACAAGA ACGAGTTCGG CGCTCTCTTC
ATCAAGAACG ACACTTTACT GGTTCTGCCC TTCAGGCGGC ACGAGGTCTG GGGAGCTTTC
GCGCCAATCT TTACAAGCAG TAAAGTGGAA GAAGCCTGGA TCTTCGAGGG TAGAGGGGTC
GTCACGCTAC GCGGCGTCGG GAGGGTGAGC TTCCCGGCAG ACTCGGTCCC GGACTCCTTA
GAAGAGCTTG TAACCAGAAT CATAGCGGCG AGCGGGGTGA ACGTCTCCCT GAGGAATCCG
AGAGGCGTAG CTGACATCGG AGAGTGGCGC GTAGCGATAC AAGTCCAGTC AGGGGGTCAG
CTCCACCTCG TCGCGACGCG AGTAACCAGC GTCCCTCCCC TCGAGGAGGT CGTCCCGCCC
CTTCTCGCAA CTAGGCTCGT GCTACTGCTG GTTCGCCCAT CCACGGTCGT GATAACGGGG
CCTCCGGGAA GCGGAAAAAC CACCGTGCTC TCCGCGCTTG TAAAGGCGGT CGCGGACTTT
TTCCCCTGGC TGCACATCGC GATAGTCGAG AAGTACAGGG AGCTCAGTTT CAGAGGGGGC
TGGTTCACGC AGGTAGTCTC GGAAAACCTA GCCGAGGGCG TTAGGTACGC TATGCGCTAC
CTCAGACCAG ACCTCCTCGT TGTCGGGGAG ATACTGGCCG AAGACTTTTG GAGCCTACTA
GAGCCGACTC GCGCGGGCAT CCCCACCGTG ACGACCTTCC ATGCGCCCTC GGCACAGAGA
GCCCTCAAGT CTCTCTCGGA TGCCCTTAGG GTTCACCTGG GGGGAGCGAC GAACGTGCTC
AACTACCTTG ACGTCCTCGT AGTAACGTCT AAGGTTATAA CGTCGAGCGG AGTCTCGAGG
GGGGTAAGCG CGGTCTACCT TTCCGACGGG CAACGCCTAG TGCCGGTCTA CCTCGAAGGG
GAGCACGCCG AGGAGGATCT CTTCAAAAAG GCTCTGCCCG ACAAGCTCTA CGTGGGCGAC
CTAGTCAACG TAGAGAAGAC TTTAAGAGAG AGGTTCAGGC CGGACGAAGC CCAAGCGAGC
TTCCTAAAGG AGCTCGCGGC GCTTTCCCTT GAACGTTGA
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| Protein sequence | MRLPRLFRGN AKREEELVSV SEALPPDARL VDKNEFGALF IKNDTLLVLP FRRHEVWGAF
APIFTSSKVE EAWIFEGRGV VTLRGVGRVS FPADSVPDSL EELVTRIIAA SGVNVSLRNP
RGVADIGEWR VAIQVQSGGQ LHLVATRVTS VPPLEEVVPP LLATRLVLLL VRPSTVVITG
PPGSGKTTVL SALVKAVADF FPWLHIAIVE KYRELSFRGG WFTQVVSENL AEGVRYAMRY
LRPDLLVVGE ILAEDFWSLL EPTRAGIPTV TTFHAPSAQR ALKSLSDALR VHLGGATNVL
NYLDVLVVTS KVITSSGVSR GVSAVYLSDG QRLVPVYLEG EHAEEDLFKK ALPDKLYVGD
LVNVEKTLRE RFRPDEAQAS FLKELAALSL ER
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