| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0644 |
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| Symbol | rpl44e |
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| ID | 4601510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 595068 |
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| End bp | 595355 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639773416 |
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| Product | 50S ribosomal protein L44e |
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| Protein accession | YP_920049 |
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| Protein GI | 119719554 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1631] Ribosomal protein L44E |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000450289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTTC CAAGCGTTAT CCGCACCTAC TGTCCGCGGT GCAAAACTTA CACAGAGCAT
GAAGTAACGC TTTACAAGGC TGGGAAGAGA AGAACCCTTG CCGAGGGGCA AAGACGCTAT
CTTAGGAAGC AGAAAGGTTA CGGTTCGAAG CGTAAGCCCG AACAGAAGAG AACTGCTAAA
GTGACCAAGA AGCAGGTTCT AAAGCTTAAG TGCAAGGTCT GCGGCTATAC GTATCACAAG
GAAGGTATCA GACTGAAGAA GCTTGAAATA GTAGAAAAGG TGAAGTAA
|
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| Protein sequence | MKVPSVIRTY CPRCKTYTEH EVTLYKAGKR RTLAEGQRRY LRKQKGYGSK RKPEQKRTAK
VTKKQVLKLK CKVCGYTYHK EGIRLKKLEI VEKVK
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