| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0606 |
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| Symbol | |
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| ID | 4601226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 560529 |
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| End bp | 561542 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639773381 |
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| Product | geranyltranstransferase |
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| Protein accession | YP_920014 |
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| Protein GI | 119719519 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGGCTC GCGTACTTGA AAGGCTCGGG GAGATAGGTG CTCTAGTAGA CCCCGTTATG
GAAAAGTACC TGCTCAGGGG CGCTAGCCCA GAGTTCCAGG ACGCTGTTCT TTACCAAGTG
AGGATGGGAG GGAAAAGGGT TCGCCCAGCT CTTACAATAG CGAGCACGCT GGCAGTGGGC
GGTAAAGAGG AGAACGCGTT GCCGGCTGCC GCGGCTGTAG AGCTTGCGCA TAATTATTCC
CTCATACTTG ACGATATAAT CGACCACAGC GAGCTCCGCA GGGGTAAGCC TACCGTGTGG
AAAAAGTACG GCATAAGCAC CGCGATACTC ATAGCCGTAC ATTACAGGGA AAGCATAACA
GAGGCTTTGA ACGATACGCC AGAGCCGCCC GTTTTCCACG CCATCATGGC GGAGACAATA
AAGCTCCTAA CTGACGGGGA GAGGCTGGAC ATACTCTTCG AGCAGTCGGG GAGGAGCGAC
GAGCCGTACG TCGTGGAGCA ACGCTATAGA GCGGTGAGGC TTGATGACTA CCTACGCATG
ATAGAGAGGA AAACGGCGAA GCTCATAGAG ACATCCTGCG TGTTCGGAGC CCTCTCGGCG
GGGCAAAGAG GAGAGATCCT CGAGGCTCTA CGGGAGTACG GGTACAACCT GGGAATGGCT
TTCCAAGTGG GAGACGACAT AATAGACATT TTCGGCGAAG AGGAGAAAAC CGGGAAAAGG
GTTGGAGGAG ACATTAAGGA GCATAAGCTG GGAAATGTCG TGGTGCTCCT AGCGCTCGAG
GAGACGAGGG ACAAGGAGAG GCTCCTCGCC ATACTGAGGA AGGAGGACGT GTCCTGGGAG
GAAGTGAAAG AGGCTATAAG TATAATCTCT GAAACGAATG CGCGCGAAAA GGCCGAGGTT
TTGCGAAGGG ACTACGTATC CCGCGCCTTG AAGGCTTTAG AGAAGCTTCC GCGAAGCGAG
TACAGGGACA TGCTCGAAGA ACTGGCAGTG TTCATAGAGA AGAGAGAGTT CTAA
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| Protein sequence | MSARVLERLG EIGALVDPVM EKYLLRGASP EFQDAVLYQV RMGGKRVRPA LTIASTLAVG
GKEENALPAA AAVELAHNYS LILDDIIDHS ELRRGKPTVW KKYGISTAIL IAVHYRESIT
EALNDTPEPP VFHAIMAETI KLLTDGERLD ILFEQSGRSD EPYVVEQRYR AVRLDDYLRM
IERKTAKLIE TSCVFGALSA GQRGEILEAL REYGYNLGMA FQVGDDIIDI FGEEEKTGKR
VGGDIKEHKL GNVVVLLALE ETRDKERLLA ILRKEDVSWE EVKEAISIIS ETNAREKAEV
LRRDYVSRAL KALEKLPRSE YRDMLEELAV FIEKREF
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