| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0582 |
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| Symbol | |
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| ID | 4600697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 533607 |
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| End bp | 534320 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639773354 |
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| Product | exosome complex RNA-binding protein Rrp4 |
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| Protein accession | YP_919990 |
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| Protein GI | 119719495 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1097] RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGAGGTG GTGCTGTGAC CATACACGTT AAGGATAGGC AGATTGTTGC GCCAGGAGAA
TTTGTCGGCG AACAGGGCAG GTTTAGGGTA GAGGGGCAAG TCTTCAGGGT GGGCAGGAAG
TACTACTCGA AGGTGCTGGG AGTAGTTACG GTGGACGAGG AGAACCGTGT CGTTAAGGTC
ATTCCCCTTA AGGGGAAATA CTTCCCGGTA GAGGGACACA TCGTCGTGGG GAAAGTTGTC
GATATAGGGT TCACTAGCTG GGAGGTCGAC ATAAACTCTC CGTATGTGGC TGTCCTACCA
GTCTCGGAGG TTACCAGCAG ACCAGTCACC ATCTCGAGAA ACGAGCTTTC CAGGATACTC
GACGTGGGCG ACCTGATACT GGCGAAGATA GTGTCCTTCG ATCTCAGCAA AGACCCTGTT
CTCACGATTA AAGAGTCAAG GCTCGGGAAA ATACCCCGGG GAACTCTCGT AGAAATTCCG
CCTCAAAAAG TACCCAGGGT TATAGGTAGG AGGGGCTCCA TGGTCTCCAT GATCGAAGAC
CTCCTCGGCG TGAAGCTGAT AGTGGGACAG AACGGAAGGA TAGTCGTTGT GGGCGACGAT
CCCCAGAGGG TCGAAATAGC CGTTCTCGCT GTTAGGAAGA TAGAGGCGGA GGCGCATACA
ACAGGTTTAA CCGATAGGAT AAAGCAGTTT ATAGAAGAGA GGTTGAGATC ATGA
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| Protein sequence | MRGGAVTIHV KDRQIVAPGE FVGEQGRFRV EGQVFRVGRK YYSKVLGVVT VDEENRVVKV
IPLKGKYFPV EGHIVVGKVV DIGFTSWEVD INSPYVAVLP VSEVTSRPVT ISRNELSRIL
DVGDLILAKI VSFDLSKDPV LTIKESRLGK IPRGTLVEIP PQKVPRVIGR RGSMVSMIED
LLGVKLIVGQ NGRIVVVGDD PQRVEIAVLA VRKIEAEAHT TGLTDRIKQF IEERLRS
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