| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0570 |
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| Symbol | |
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| ID | 4600614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 519792 |
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| End bp | 520874 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639773340 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_919978 |
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| Protein GI | 119719483 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCG AGGACTATGC TCAGCTTCAC GTCGTATGGG GCGAGGGTTA CGACGAAATA
TCGTTTACAC CTTTCTCTCT AAGAGACGAG TGGACTCTGG CGCGCAGGCT GTTCTACGAG
AAGTATCTGG GCTTTCTTAG GAGAACATTC AAGGTAGAAG TGCACGAGGT GAAGCGTTAC
CCGGAGAGCG TGCTGTTGCT AGCCCACGAT AAGGAATACG TGGATTACGT GAAGAGAATG
TCCGAGTTGG GGGCAGGGTT GCTTGACTAC GGCGATACGC CCGCTTATCC TGGTGTGTTC
GAGAAGGCGC TGCTGGCGGT ATCGGGTACG CTTACCCTGG CGGATATCCT GGTGAAGGCC
GGGAGGGGCG TCGCGTTTAA CCCTCAGGGT GGTTTTCACC ACGCTAGGCG TAGGTCAGCA
GGAGGTTTCT GCGTTTTCAA CGATGTGGCA GTTGCAGCGA GGTACGTCAG GGAGAGGGGT
TACGAGAGGG TAGCGATAAT CGATGTGGAT GCACACCACG GAGACGGGAC GCAGGAGATA
CTGTACAGGG ATCCCTTGCT GAAGGTTAGC GTGCACGGCT ATGGTTACGG ATTCTACCCG
GGGACAGGCT GGATCGACGA GCTTGGAGAA GGGGATGGAC TCTGCATGAA CATCAACGTT
CCTATACCTC TTACAAGTGC TGACGATGTT TTCGAGCTCG TGGTCCGAGA ACTCTTGGCT
CCGCTGATTT CCAGCTACTC TCCGGACTTC GTGATTGTCC AGTCGGGGGT GGATGCTTAC
AGGGGCGACC CCCTCGTAGG GCTTAGGCTA ACCGATAACT CCTACAAGGT GTTCGCAGAG
TTTTTATCCG GGATTGCAGC GAGAGGGGTA CCAGTACTCC TGACGGGCGG GGGAGGGTAC
CAGCCCGAGG TTACGGCGAG GACCTGGGCA TTCATACTTT CATGCGTGGC TGGACGTTGC
CTAGAAGAGC TCGGCCCGCT CGACGAAAAG ACGTCTTCCG ACAGAAAAAC AGTTGAGATT
GTATCTTCTC GAATTGACTA CCTACTGAGA AGTCTGAAAG AGTGCGAGGT AAAGAAACGC
TAG
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| Protein sequence | MKREDYAQLH VVWGEGYDEI SFTPFSLRDE WTLARRLFYE KYLGFLRRTF KVEVHEVKRY
PESVLLLAHD KEYVDYVKRM SELGAGLLDY GDTPAYPGVF EKALLAVSGT LTLADILVKA
GRGVAFNPQG GFHHARRRSA GGFCVFNDVA VAARYVRERG YERVAIIDVD AHHGDGTQEI
LYRDPLLKVS VHGYGYGFYP GTGWIDELGE GDGLCMNINV PIPLTSADDV FELVVRELLA
PLISSYSPDF VIVQSGVDAY RGDPLVGLRL TDNSYKVFAE FLSGIAARGV PVLLTGGGGY
QPEVTARTWA FILSCVAGRC LEELGPLDEK TSSDRKTVEI VSSRIDYLLR SLKECEVKKR
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