Gene Tpen_0564 details

Gene Information

• Locus tag: Tpen_0564
• Symbol: argS
• ID: 4600607
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 511980
• End bp: 513887
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 639773335
• Product: arginyl-tRNA synthetase
• Protein accession: YP_919973
• Protein GI: 119719478
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0018] Arginyl-tRNA synthetase
• TIGRFAM ID: [TIGR00456] arginyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTACAATC CTCACGAGTT CCTAGTCGAC AACGTGAAGA GACAGGTGGC AGAGTTTCTA 
GTATCCAAGG GTTTCGCCGT GGAGCCGGCG CAGGTAGAGG TGCGAAAAGC TCCGAAGACG 
TTTGGCGATC TCGCAGTTCC CCTTTTCACC ATCTCTAAGG TGGTGAAGGG GCTGAGCGTA 
GAGGAGGTGT CCACGCTTTT CGGGGGCTTT AAACCATCGG GACTCGTGAA GTCGTCGAAA 
GTGGAGAACA ACTTTCTGAA CCTCGTGGTC GACGAGAAAA GATACGCGGA GGTAGTCTAT 
AGTAGTGTTG TTAGGCTCGG CGATAACTAC GGGTTCGTGC CGGCCGAGAC GAGAGAGAGG 
ATCATAGTAG AACATGTAAG CGCAAACCCC ATACACCCAC TTCACGTAGG GCACCTGAGG 
AACGGAGTTC TCGGAGACTC GCTGGTAAGG CTTTTGCGCG CCAGGGGTCA CGAGGTGAAG 
GCTCACTTCT ACGTAGACGA CGTGGGGTTG CAGGTTGCAT ATGCGGCTAA AGCCTTCAGC 
ATAGTGGGTG GGGAGGGTCA AGGGAAGAAG GATCACTTCG TCGGAACGCT CTACACAGCG 
ATCAACCTCT TAATAGAGGT CAAGAAGCTA AGGGAGAAAG CTAAGAGTGC TAGCGGCGAC 
GAGCTCGCCG AGATAAACAG CAAGGTCTCC GAGTATCTGT GGCGTCTTGG AGAGCTCTCC 
GAGAAGTTTC CAGGGTTGAT CGAGAAGCTG TTAGAGTGGG TCGAGAAAAC TGAGGACCCC 
GAAGCCGAGC TACGCAGGTT GAACAGGATG TACGAAGAGG GTGACCCGTC GACCGTAAAG 
CTTACGAGGC GCGTGCTCGA TTACTGCCTT GAAGGTATAA GGGAAACCCT TGATAGGCTC 
GGCATATCGT TCGATAGCTG GGACTGGGAG AGCGAGCTGA CCGTGTGGAG CGGCGCGACA 
AGCGACGTTA TAGACAAGCT TAGGGGGCTC GGGCTGGTGG AGAGAAGGGA CGGCGCCCTG 
GTGTTCAGAG CTGACCTGCT AGCGGAGTCC GAGGATGTCC GCCGCGCGGC GGGCATTCCC 
CCCGGGTTCA CCGTTACGCC TATGACCCTT GTGAGGTCGG ACGGTACGAC TCTCTACACG 
ACTAGGGATA TTGCGTACTC GATTTGGAAG CTTTCGAGAG CCGACCGCGT AATCAACGTG 
ATCGCCGTTC AGCAGACGCT GGCCCAGGCC CAGTTGAGGC TAGCATTGTA CGCGCTCGGC 
TACAGGGACG TGGGCAGGAG GCTTATCCAC TACTCGTACG AGATGGTGAA CCTGCCCGGG 
ACCAGGATGT CCAGCAGAAG GGGTGTCTAC GTCTCTGCGG ACGAGGTAAT AGAGGAGGCT 
GTCGCCAGGG CAAAGGAGGA GATAGCAAAG AGGGGGGTAG GCGACGTAGG CGACGCGGAA 
AAGGTAGGTA TAGGCGCACT AAAGTTCTTC TTCCTCTCAC AGACTCCGGG CAAGGTGCTG 
ACCTTCGACT GGAAACGCGT ACTGGACTTC GAGCAAAACA GCGGGCCATT CGTGCAGTAC 
TCCTACGTGA GGGCTCTGGG GATACTCAGA AAGGCCTCGG AGGAACATAT ACGCCCCGAC 
GAGCTGAACG TAGGCGACGT AGGAGAAGAG GAGCACCCAT TGATACTTCT AGTTGGAGAG 
TTTCCCAACG TGGTGAAAGA GGCAGCCGAC AACCTGAGAC CAGACCTCCT AGCCTCTTAC 
CTCAACACCC TGGCTACGGA GTTCAACCGC TACTACGACA GCTACCCCGT GCTCAGGGCG 
CCCACCACCT CCAAGAAGTA CTCGAGGCTT GCCGTCGTGA AAATGGTGGA GCAAACACTG 
AAAAACGGCA TGAAACTCCT GGGAATAGAG GCGCCACAGA GGATGTGA 

 

Protein sequence

MYNPHEFLVD NVKRQVAEFL VSKGFAVEPA QVEVRKAPKT FGDLAVPLFT ISKVVKGLSV 
EEVSTLFGGF KPSGLVKSSK VENNFLNLVV DEKRYAEVVY SSVVRLGDNY GFVPAETRER 
IIVEHVSANP IHPLHVGHLR NGVLGDSLVR LLRARGHEVK AHFYVDDVGL QVAYAAKAFS 
IVGGEGQGKK DHFVGTLYTA INLLIEVKKL REKAKSASGD ELAEINSKVS EYLWRLGELS 
EKFPGLIEKL LEWVEKTEDP EAELRRLNRM YEEGDPSTVK LTRRVLDYCL EGIRETLDRL 
GISFDSWDWE SELTVWSGAT SDVIDKLRGL GLVERRDGAL VFRADLLAES EDVRRAAGIP 
PGFTVTPMTL VRSDGTTLYT TRDIAYSIWK LSRADRVINV IAVQQTLAQA QLRLALYALG 
YRDVGRRLIH YSYEMVNLPG TRMSSRRGVY VSADEVIEEA VARAKEEIAK RGVGDVGDAE 
KVGIGALKFF FLSQTPGKVL TFDWKRVLDF EQNSGPFVQY SYVRALGILR KASEEHIRPD 
ELNVGDVGEE EHPLILLVGE FPNVVKEAAD NLRPDLLASY LNTLATEFNR YYDSYPVLRA 
PTTSKKYSRL AVVKMVEQTL KNGMKLLGIE APQRM