| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0555 |
|---|
| Symbol | |
|---|
| ID | 4600519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 503583 |
|---|
| End bp | 504593 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639773326 |
|---|
| Product | putative RNA methylase |
|---|
| Protein accession | YP_919964 |
|---|
| Protein GI | 119719469 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAG TGCGCATACT CGCTACCACC GTGCAGGGAC TTGAGTGGTT TGTCTGCGAG
GAGCTCCGCG AGATATGCGG AGAAGTAAGG GTTTTCTCGG CGCGCGAAGG GTCGGGGAGA
GTTATCGCCG AGATAGACGA ACGGTGTTTA GCGATTCTCA TGGAGAAGGC GCGGTCGGTC
GAGAAAGTGT ACTTGTTCTT TGGCGAAGCG GCATCGATAG AGGAGGCGGG AATCGACCTT
TCGGAGAAGC TGAGAGAATT CTCAGGTTTC TTCAGGTTCT TCTCTGTTCA CGCCGAGAGG
ATAACTAAGG ATATCGATCT AACGTCCCTA GAGATAGCCG CTAAGATAGG GGAAATGGTA
AAGACGAGGC TGAATCTCGA CGTCTCGCTG GACTTTCCAG ACATACCCGT GTACGTTGAG
TACGAGAAGG GGGTTTACAG GTACGGTGTA GACCTTTGCT TCCACCGTAG CCTTAGAGAC
AGACCCTACA GGAGATTCAT CCATAGATCC GCGCTCAACC CCCTGATTGC CTATGCCCTC
TGCCGCGCGG TGCGCGGTGG GAAATCCTTA TGGGATCCCT TCTGCGGTAG CGGAACCATA
CCGCTGGAGT GCCTAGAAGT CTACCCCTGG GCACGCGCTG TATGTAGCGA TGTAAACGCG
GAGTTTATTG CTGGAGCATT GCAAAACTCT CTCGCGGTGG GCAAGGAGCT AGATCTTGTG
GTTTCTGATA TCAGGAGTGC TCCCTTAAGG TCAGGCTCCA TCGATGCTGT CGTGACGAAC
CCACCGTTCG GGATAAGGGA GAAGGCTGTG GGAGGGCTCC GGAAGGTTTA CGAGGCTCTC
TTCACCGAGG CTTCCCGCGT CCTCGTCCAA GGGGGGAGGC TTGCCGTACT TACGCCCCAC
AGAAAGCTCG TCGAGAGCCT TGCACAGAAA CACTCGTTCT TGAAAGTAGG AGAGTGGAGG
CTGAACGAGG GAGGATTACT GAGTTACATG CTACTCTACT CGAGAGAGTA G
|
|---|
| Protein sequence | MKEVRILATT VQGLEWFVCE ELREICGEVR VFSAREGSGR VIAEIDERCL AILMEKARSV
EKVYLFFGEA ASIEEAGIDL SEKLREFSGF FRFFSVHAER ITKDIDLTSL EIAAKIGEMV
KTRLNLDVSL DFPDIPVYVE YEKGVYRYGV DLCFHRSLRD RPYRRFIHRS ALNPLIAYAL
CRAVRGGKSL WDPFCGSGTI PLECLEVYPW ARAVCSDVNA EFIAGALQNS LAVGKELDLV
VSDIRSAPLR SGSIDAVVTN PPFGIREKAV GGLRKVYEAL FTEASRVLVQ GGRLAVLTPH
RKLVESLAQK HSFLKVGEWR LNEGGLLSYM LLYSRE
|
|---|
| |