Gene Tpen_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0548 
Symbol 
ID4600512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp497840 
End bp498133 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content52% 
IMG OID639773319 
Product30S ribosomal protein S26e 
Protein accessionYP_919957 
Protein GI119719462 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG4830] Ribosomal protein S26 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAAGA AGAGGAAGAG CCGCGGGCGT CACAAGGGCG ACAAGGGTAA GGAGGACCTG 
GTGCAGTGCG ACGAATGTGG CGCCCTTATT CCGAGGTCGA AGGCTGTTAA AATCACCAAG
CCAGTAATGC CCATTGATCC TCAGCTGGCA AAGGAGCTTA GAGATAAGGG AGCGATACTC
CCGCAGTACA CTGTTACGAA GTATCTTTGC CTTAGGTGCG CGATCCACCG TGGGATAATC
AAGATTCGCC CAGAGGAGGA GAGAAAGTCC CAGAAAATCA ACTTGCCGTT CTAA
 
Protein sequence
MPKKRKSRGR HKGDKGKEDL VQCDECGALI PRSKAVKITK PVMPIDPQLA KELRDKGAIL 
PQYTVTKYLC LRCAIHRGII KIRPEEERKS QKINLPF