| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0545 |
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| Symbol | |
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| ID | 4600502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 495577 |
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| End bp | 496350 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639773316 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_919954 |
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| Protein GI | 119719459 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCGCGC ACCGCGAGGC CCCCTGCGAA CGGCTCGCTA AGGAGGTTTC CGTGGCATTC
GTAGAGCCGC TTTACGAGCA AAACATAGGT TACATTGCCC GCTCCATGAA GAATTTTTGT
CTCGCGAAGC TCTACCTGGT GAAGCCTAGG TGCAGCGTGG GGCTTGAGAG CAGGAGGTAC
GCGATGCACG CGGCGGACAT AGTGGAGAAC GCCGTGATCG TTGGAAGCCT CGGCGAGCTC
GTAGGTATGC ACGACCTAGT TGCTTGTACA ACTGGAGTTA AGGGGAAGCC ACCCCTGCGG
AGGTACGTAT CACCTGGCGA GATGGCTTCT CTCTTTGCCG AGTCTACGGG GTCTAAGCTC
GTCGTAATAG GCAGGGAGGA CTGGGGGCTT AGCGCGGAGG AGCTTTCAAT ATGCGACATG
CTTGTAACTA TAGAGGCGAA CCCCGAGTAC CCGTCGCTTA ACGCTTCCCA CGCCGCCGCG
ATAGTATTCT ACGAGCTTTT CAACAAGTAT CACTCGGTTC AGCAGAGCTT GGAGAGGCCG
CCGAGAGAGG AAGTGGAGGC TTTCCTGAAG CACCTCGGAG ACCTTACCAC GCTACTAGGC
TACGATGAAA CAAGGTCTGA ACGCCTCCTG CTCTCGATTA AACGTTTGCT AGCCGAAACA
CGTTTCTCGA AGACGGATCT GAGGATTCTC TTCGGGCTCG TGAGAGACAG TTTGGAGACC
ATAAAGCGTA CACACCGAGA AAGCGCGCGA ATAACGCATA AGCAGTCGAA GTAG
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| Protein sequence | MGAHREAPCE RLAKEVSVAF VEPLYEQNIG YIARSMKNFC LAKLYLVKPR CSVGLESRRY
AMHAADIVEN AVIVGSLGEL VGMHDLVACT TGVKGKPPLR RYVSPGEMAS LFAESTGSKL
VVIGREDWGL SAEELSICDM LVTIEANPEY PSLNASHAAA IVFYELFNKY HSVQQSLERP
PREEVEAFLK HLGDLTTLLG YDETRSERLL LSIKRLLAET RFSKTDLRIL FGLVRDSLET
IKRTHRESAR ITHKQSK
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