| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0536 |
|---|
| Symbol | |
|---|
| ID | 4601049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 486297 |
|---|
| End bp | 487889 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639773306 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_919945 |
|---|
| Protein GI | 119719450 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1855] ATPase (PilT family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCACG ACGAAAAAGT ATACGTGCCT GACACGTCTG CTATACTGAG CGGCGCGCTC
AGAGAGGCTG TTGCGCAGGG TAGGTTAGCT GGGCGTATCT TGATTCCTGT CTATGTGCTC
AATTACTTCG AGGAACAGGC GCGCCGCGGG ATAAGCGCTG GAGTAAGTGG TGTTAGGGAG
CTTAACCTGC TGAGAGACGT TGCGGACTCG ATGCCCGAAG TAGTGGAGCT TGAATACGTG
TATGAGCTCC CAGTGTCTCT GAGGGGTTTG CGGGACCTAA ACCCGGACCT GGTTTGTAGG
CTGACTGCCG TGGAGAACGG CGGCGTGCTG GTAACGTGCG ACGAGCTTTC GGCTAGGGTT
GCGAGGGCGC TCGGCGTGGA GGTGGAGCTT CTCCCGCCGC GCGGAGGCGC CGAGTTCTTC
CTGGACAAGC TTTTCGGTCC CGACACTATG AGCGTGCACT TGAAGGAGGG AGCTAAGCCG
TACGCGAAGA AGGGCGTGCC TGGGCAGTGG ACCTTCGTTA GCCTACGGGA CCAGCCTTTG
ACGCGCGAGG AGATGGAGGA CTACGTGCGC CAAGTATTCG AGATGGTCAA GACTTCTGGG
AGCTCGGCGT TCGTAGAGTA CGAGGGCACG GGGGTTACCA TAGTGCAGCT AGGGTTATAC
AGGATAGTCA TAACGAAGCC TCCCTTCTCG GACGGCATCG AGATAACTGC TACTAGACCT
GTTGCGCGGC TACGCCTGGA GGACTACAAC TTGCCCAAGA AGCTCATAGA GCGCCTCGAG
AAGCAGGCCG AGGGTATACT CATCGCGGGT GCCCCGGGGA TGGGTAAGAC CACGTTCGCC
CAGGCGCTCG CCGAGTACTA CTACCGCAAG GGGAAAGTCG TTAAGACCAT AGAGTCTCCG
AGGGACATGC ACCTGCCCGC CGATATAACG CAGTACTCTA GGAACTACGC TACCTCCGAG
GAGATACACG ACGTGCTCCT ACTCAGCAGG CCTGACTACA CATTCTTCGA CGAGATGCGG
GATACGAAGG ACTTCGAGCT CTACGCTGAC CTCCGCCTCG CCGGCGTGGG TATGGTCGGA
GTTGTCCACG CGACTTCGCC TATAGACGCC GTTCAGAGGT TTATCGGTAG AGTGGAGCTC
GGCATGATAC CTTCGATAAT TGACACCGTG ATCTACGTGA AGCACGGGAG GGTTGAGAAG
GTATACTCCT TGGAGACTAC AGTCAAGATA CCGCATGGGC TGAAGGAGGA GGACCTGGCG
AGACCCGTTG TCGTTGTCAG GGATTTCATG ACCGGAGAGC CTGAGTACGA GCTGTACGTG
TTCGGCGAGA GGACGTTCGT GGTTCCCGTT AAGCGGGGCG GTACAGGCAA GGTGAGCATA
GAGGGGTACA AGATGAAGAA CGCGTTGGAG AAGGCTCTCT TCAAGATGCT CGGAGACGGA
GGCTACGAGC TCGTGATAGA CGAGAACGAA TCGCTCGTTG TGATCAAGGT CCCGGTAGAC
GGTTTTAACT ACCTTGCGGG TAAACCTCGA AGGAAGCTTG AACGCATCGC TAGGCGCTAC
GGTTACACAC TGGAGATCAG ACCTTCTTTC TAG
|
|---|
| Protein sequence | MEHDEKVYVP DTSAILSGAL REAVAQGRLA GRILIPVYVL NYFEEQARRG ISAGVSGVRE
LNLLRDVADS MPEVVELEYV YELPVSLRGL RDLNPDLVCR LTAVENGGVL VTCDELSARV
ARALGVEVEL LPPRGGAEFF LDKLFGPDTM SVHLKEGAKP YAKKGVPGQW TFVSLRDQPL
TREEMEDYVR QVFEMVKTSG SSAFVEYEGT GVTIVQLGLY RIVITKPPFS DGIEITATRP
VARLRLEDYN LPKKLIERLE KQAEGILIAG APGMGKTTFA QALAEYYYRK GKVVKTIESP
RDMHLPADIT QYSRNYATSE EIHDVLLLSR PDYTFFDEMR DTKDFELYAD LRLAGVGMVG
VVHATSPIDA VQRFIGRVEL GMIPSIIDTV IYVKHGRVEK VYSLETTVKI PHGLKEEDLA
RPVVVVRDFM TGEPEYELYV FGERTFVVPV KRGGTGKVSI EGYKMKNALE KALFKMLGDG
GYELVIDENE SLVVIKVPVD GFNYLAGKPR RKLERIARRY GYTLEIRPSF
|
|---|
| |