| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0499 |
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| Symbol | |
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| ID | 4601333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 452787 |
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| End bp | 454592 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639773266 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_919909 |
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| Protein GI | 119719414 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00491] translation initiation factor aIF-2/yIF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.116589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATG ACCAGGGCTC TCAATTTCTT AGGGCTCCAA TAGTCGTTGT TCTGGGGCAC
GTTGATGCAG GCAAGACTAC GTTGCTGGAC AAGATCAGGG GGACGGCTGT AGCTAAGCGA
GAACCCGGTA CGATGACGCA GCATATCGGC GCTTCTTTTC TCCCCTGGAA GGCCCTAGAA
GCCGTATGCG GCAGTCTTGT CTCGCAGATA AGAGCCGAGG TTGTGATTCC AGGCTTCCTG
GTTATCGATA CGCCTGGCCA CGAAGCTTTC TCCAATCTGA GGAGGCGCGG AGGGAGCATA
GCGGACATAG CGATACTGGT AGTAGATGTT TTGAGGGGTC TTGAGCAACA AACCTTCGAG
TCTATAGATA TCCTGAGAGA GAGGAAGGTT CCGTTCATTG TAGCGGTGAA TAAGATCGAT
AAGATCCCCG GGTGGAAGAG TTTTCCGAAT ACCCCGTTTG TAGAGTCGGT GAAAAGGCAG
AGTGAAGCCG CTCAGCTAAA ACTGGAGGAG CTTTTAAGCT ATATAATCCA GCAGTTCGCG
TCGCTGGGCT TTAGGAGCGA CAGGTACGAC AGAATACGGG ACTTTACCAG GGTACTCGCC
TTGGTCCCTG TAAGCGCGGT AACAGGGGAA GGTATACCGG ACCTGTTGCT CGTATTGGCC
GGGCTTGCTC AGCGATACCT GAAGGGCAGG CTTCTCGCGA GCATTGCTCC GGGAAAAGGG
GTTATTTTGG AGCTTAAGGA GGAGGCTGGG CTGGGAATGA CCGCCACGCT GATTCTCTAC
GATGGGGTTA TTCGAAGAGG CGACATCGTG GTAACCGGTG GGATTGAGGG GGCTTTTTCT
ACAAGGGTTC GCGCACTACT TATGCCAAAA CCTCTCGACG AGATGAGGTC TCCGGAGGAC
AGATTCCTCG AAGTGGAAAG GATAGTAGCT GCCGCGGGCG TGAAGCTGGT AGCCGAGGGG
TTGGAAAAGG CTGTGCCCGG CGCGCCGCTC TTCGTCGCGG TAAGCGAGGA AGAAGTGGGT
CGTCTAAAGC AACTAGTAGA GGAGGAGATC TCCGGCGTGA AGTTCGAGAG GGACGTTGTG
GGCGTTGTTG TCAAGGCGGA TACTCTCGGA ACGCTAGAGG CGCTCGTAGG TTACCTGAAG
AAACAGGGGA TACCGATACG CGTGGCAGAT ATAGGACCGG TCGTTAAAAG GGACGTCGTT
CAGGCGAGCA TGGTTAAAGA GAAGGATCCG CTTTACGCGG CTATACTAGC CTTCAACGTG
AAGATTCTAC CAGAGGCGCA GGATGAAGCA GCCCGCCATG GTATCCCGGT GTTCCAGGAG
AGAATCATGT ACAAGCTAGT TGAAAACTAC CAGAAATGGT TGCAGGAAAC TAGAGACGCT
GAAGTGAGGA AGGCGTTCGA AAAGATAACC CCGCCTGCCG TGGTACAGAT CCTGCCGGGG
TACGTCTTCC GCAGGCGTGA CCCGATAATC GTGGGTGTAA GGGTTGTCTG CGGCAGGATA
CGCAGTGGGG TACCGCTGAT AACGAAGGAC GGTAGGGAGA TAGGAGAGAT CATGCAGATA
AAAGAACACG ACAAAGTGCT GGACGTGGTG AGCGAGGGGG CCGAGGTAGC TATTTCGATT
AGGAGCAAGG CTATAGTAGG GCGGCAGGTA AAGGAAGGAG ACTACTTATA CTCCAACCTT
TCGATCGAGG AGATAAACCG TCTTCTGGAG AAGTACGAAA AGTACCTGGC AGAGAACGAG
AAAAGCTACT TAAGGAAGCT CATGAGGTTC AAAATGGGTT TAAGCAAGGA GATAGAATAC
CCTTAA
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| Protein sequence | MSNDQGSQFL RAPIVVVLGH VDAGKTTLLD KIRGTAVAKR EPGTMTQHIG ASFLPWKALE
AVCGSLVSQI RAEVVIPGFL VIDTPGHEAF SNLRRRGGSI ADIAILVVDV LRGLEQQTFE
SIDILRERKV PFIVAVNKID KIPGWKSFPN TPFVESVKRQ SEAAQLKLEE LLSYIIQQFA
SLGFRSDRYD RIRDFTRVLA LVPVSAVTGE GIPDLLLVLA GLAQRYLKGR LLASIAPGKG
VILELKEEAG LGMTATLILY DGVIRRGDIV VTGGIEGAFS TRVRALLMPK PLDEMRSPED
RFLEVERIVA AAGVKLVAEG LEKAVPGAPL FVAVSEEEVG RLKQLVEEEI SGVKFERDVV
GVVVKADTLG TLEALVGYLK KQGIPIRVAD IGPVVKRDVV QASMVKEKDP LYAAILAFNV
KILPEAQDEA ARHGIPVFQE RIMYKLVENY QKWLQETRDA EVRKAFEKIT PPAVVQILPG
YVFRRRDPII VGVRVVCGRI RSGVPLITKD GREIGEIMQI KEHDKVLDVV SEGAEVAISI
RSKAIVGRQV KEGDYLYSNL SIEEINRLLE KYEKYLAENE KSYLRKLMRF KMGLSKEIEY
P
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