| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0495 |
|---|
| Symbol | rps28e |
|---|
| ID | 4601329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 447446 |
|---|
| End bp | 447679 |
|---|
| Gene Length | 234 bp |
|---|
| Protein Length | 77 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639773262 |
|---|
| Product | 30S ribosomal protein S28e |
|---|
| Protein accession | YP_919905 |
|---|
| Protein GI | 119719410 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2053] Ribosomal protein S28E/S33 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCTC AGGCGCCTGC CGATAAATTC AGCGATGCCG TGCCAGCAGA GGTGGTACAG
ATAATAGGTA GGACGGGGAT TACGGGAGAG GTAACCCAGG TACGTGTACG CGTACTGGAG
GGGAGGGATA AGGGGCGGAT CCTCACCAGG AACGTACGTG GACCCGTCAG AGTAGGAGAC
ATAGTTATGC TTAGGGAGAC TGAGCGCGAG GCTAGGAAAA TCGCAACTAG GTGA
|
|---|
| Protein sequence | MSSQAPADKF SDAVPAEVVQ IIGRTGITGE VTQVRVRVLE GRDKGRILTR NVRGPVRVGD
IVMLRETERE ARKIATR
|
|---|
| |