| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0492 |
|---|
| Symbol | |
|---|
| ID | 4601790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 444789 |
|---|
| End bp | 445601 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639773259 |
|---|
| Product | ribosomal RNA adenine methylase transferase |
|---|
| Protein accession | YP_919902 |
|---|
| Protein GI | 119719407 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTATCGG CGTACGTGAG GGAGGCTCTC AGGAGCATAA GGTATAAGCG TAGATTGGGG
CAACACTTCC TGGTAGATGA CACCGTTGCT TCGCGTATCG CGTCCTTTGT AAACGGCGAA
GATGTGTACG AAGTTGGATG CGGGTTGGGG AGCCTCACTC TACCCTTGTC GGAAAGGTCT
GCATATGTTT TCTGTTGCGA AAAGGATGAA GCGCTGGCCC TCTTCCTTTC TAGAGAGCTC
TACAGGCGGG GTATAGGTAA CGTAGACATA ATGGTTGGCG ATGCGCTACG CATAGACTTG
TCGCGCTCGA GTCACCTCGT AGTCTCGAAC ACTCCGTTCA ATATCTCCTC CCAGCTCGTA
GTGAAGCTTT GCTACGACGA GGGGCTCCTT AAAGCATACC TTGGCTTACA GAGAGAGGTT
GCTGAAAGGT TGTACGCAAA GCCCGGCACG AGAGAGTACG GAAGGCTCAG CGTGATAAGC
CAGCTTTGCT TCAGCATCGA GCGTTTATTC GACGTTCCCC CCAACGCGTT CCTTCCACCG
CCGAAGGTTT TCACCTCCTT CGTAAGACTA GTTCCACTCC GAAGACTCGG CGCCGAGGAT
GTACGGCTTG TCGAGGAGTT TAGCAGGAGA ATATTTCCGT ACATAAACAG AGTCGTTACC
ACTGCTCTGC GCATAGGGCT GGGGGTAAAC CGTGAAGTGG CCGAGGATCT AGTAAGGGAG
TCGAACGTAT TGGGCTCCAG GAGGGTACGA GAAATAAACC CAGAGGAAGT GCTTGCACTT
GCGCGGCAAG CACGTGCGAA GGGTCTCCTC TGA
|
|---|
| Protein sequence | MLSAYVREAL RSIRYKRRLG QHFLVDDTVA SRIASFVNGE DVYEVGCGLG SLTLPLSERS
AYVFCCEKDE ALALFLSREL YRRGIGNVDI MVGDALRIDL SRSSHLVVSN TPFNISSQLV
VKLCYDEGLL KAYLGLQREV AERLYAKPGT REYGRLSVIS QLCFSIERLF DVPPNAFLPP
PKVFTSFVRL VPLRRLGAED VRLVEEFSRR IFPYINRVVT TALRIGLGVN REVAEDLVRE
SNVLGSRRVR EINPEEVLAL ARQARAKGLL
|
|---|
| |