| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0421 |
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| Symbol | |
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| ID | 4602100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 382800 |
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| End bp | 383021 |
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| Gene Length | 222 bp |
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| Protein Length | 73 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639773186 |
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| Product | like-Sm ribonucleoprotein, core |
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| Protein accession | YP_919833 |
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| Protein GI | 119719338 |
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| COG category | [K] Transcription |
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| COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGGAGG GAACGATCTC CGTGCTCGCA GAGTCACTCG AAAAGAACGT CCTAGTGAAG
CTCAAAGGCG GGAGGGAGAT CCGAGGACAG TTAAAGAGCT ACGATTACCA CCTGAACCTC
GTCCTCGAAA ATGCAGAGGA AATAAGGGGT ACGCGGACAA GACAGCTTGG AACTATAATA
GTCAGGGGGG ACAACGTCAT CCTGGTCTCT CCGGCACCGT GA
|
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| Protein sequence | MEEGTISVLA ESLEKNVLVK LKGGREIRGQ LKSYDYHLNL VLENAEEIRG TRTRQLGTII
VRGDNVILVS PAP
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