| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0409 |
|---|
| Symbol | |
|---|
| ID | 4601503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 373983 |
|---|
| End bp | 374381 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639773174 |
|---|
| Product | translation initiation factor IF-5A |
|---|
| Protein accession | YP_919821 |
|---|
| Protein GI | 119719326 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
|---|
| TIGRFAM ID | [TIGR00037] translation initiation factor eIF-5A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC GCCCTGAGGA GGCAGGAAAC ATCAAAGTAG GCTCCTTCAT AGTAATAGAC
GGCGAGCCGT GCAAAGTAGT CGAAGTAGAG AAAAGCAAGA CAGGCAAGCA CGGATCGGCA
AAGGCCAGGA TTGTCGGGAT AGGGTTCTTC GACGGCGGCA AGAGAAGCAT AGTCGTGCCC
ACAGACGCGA GGGTAGAGGT ACCCATAATC AAGAAATTCA CCGCGCAGGT AGTGGCTTTC
GTTGGCGACA ACGTACAGCT AATGAACCTA GAGGACTACT CAACATTTGA AATTCCGATG
CCCCAAGAGG AGGAGATAAA GTCCAAGCTA AGCGAAGGCG TAGAGGTAGA AGTCTGGGAG
GTCATGGGTA GACACAAGAT CATGAGGGTA CGTGCCTAG
|
|---|
| Protein sequence | MSTRPEEAGN IKVGSFIVID GEPCKVVEVE KSKTGKHGSA KARIVGIGFF DGGKRSIVVP
TDARVEVPII KKFTAQVVAF VGDNVQLMNL EDYSTFEIPM PQEEEIKSKL SEGVEVEVWE
VMGRHKIMRV RA
|
|---|
| |