| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0404 |
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| Symbol | |
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| ID | 4601498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 369207 |
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| End bp | 370559 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639773169 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_919816 |
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| Protein GI | 119719321 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGTTTA CCGTATTCGT GGAGCCTGGA GCATCGGAGG TTGTGCCAGC GCTCGGGCTG
GATTTCCGGG AACTAGTCGG ATACCACCAG AAGCTGGGGA GGTTGAAGCA GCTTCAGAAA
ATGGTGGAGT TGGAGTTTGA AGCGGCTTAC TACATGAAAA AGTACCAGCC CGATCCCGTG
CTGATGAATA CGCGTTATGG AAGGCTGATC TCCAACGTTC TTGCAAGACG CGAAACGGTA
TACGAGGTTG TAGGGGGGAA AAGCGACTCG GAGGTCTACG CCAAGTTCCT AAGGGCTATG
GAGAACCCCC AGCCCCTCTC AAGGATAGAG AGTAGCACTG GTTTAAAGGA GGTGGCTGTG
GACCTCTTCA GACTGCCTGT TCCCAAGTTT TTTGAGCGCG ACGGAGGTAG GTACATAACC
GCGGGGGTAT TCATCGCGAA GGATCCTCTT ACGGGCGCTG TCAACGCGAG CATTCACAGA
GCGATGATCC TTGACGAGGA GAGCCTCGCC GTGAGGCTTG TACCGAGGCA CCTGTACCAG
ATACACAGGA ACGCGGAGAA AGCTGGGAGG AACCTCCCCG CCGCCATACT GATAGGCGCG
CCCCCGCTGG TCTACCTCTG CGCGGCGTCG AGCCCACCCT TCGGCGTGTA CGAGGTGGAG
GTGGCTAACG CGCTGGCGGG GGGCAGGCTT ACGGGTACGG ACTCGCTGCT CGACGGAGTT
GTTCTACCGC TACCGGTGGA GGTGGTTCTT CTAGGGGAGT TCATAGCCGG GAGGAGGGCC
AAGGAGGGCC CCTTCGTGGA CATCCTGGGA ACCTACGACA TCGTCAGGGA GGAGCCGGTT
TTCCGCGTGG AGTCGATCCT TACGCGCCAG GACCCGCTCT TCTACTCGAT CCTGCCCTCG
GGCCTCGAAC ACATACTGTT GATGGGCTTT CCAAGGGAGG CCGCGATATG GAGCGTTGCG
TCGAGAACGG CTACGGGTGT AAGGAAGGTT AGGCTAACGC CTGGGGGAGG GGGGTGGCTT
CACGCGGTGA TATCTATGGA GAAAACCACG GAAGGCGACC CCAAGAATGT TATACTGGCC
GCTTTCGCCG CTCACCCCTC GCTTAAAACG GTCGTAGTCG TTGATGCCGA CGTAGACCCC
GACGACCCCC TAGACGTTGA ATGGGCGCTT GCAACACGCA TGCAACCAGA CGAAGACATC
GTGATCATAA AGGGAGCCAG GGGTAGTAGC CTTGACCCCT CCGCCGACCA GGTAACTCTT
CAGACGTCTA AGCTTGGGAT AGACGCTACC CGACCACTCT CGAAGGACAA AAGCCTCTTC
GAGAAGGCGC GGATACCCTT CACCGAACAC TAA
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| Protein sequence | MRFTVFVEPG ASEVVPALGL DFRELVGYHQ KLGRLKQLQK MVELEFEAAY YMKKYQPDPV
LMNTRYGRLI SNVLARRETV YEVVGGKSDS EVYAKFLRAM ENPQPLSRIE SSTGLKEVAV
DLFRLPVPKF FERDGGRYIT AGVFIAKDPL TGAVNASIHR AMILDEESLA VRLVPRHLYQ
IHRNAEKAGR NLPAAILIGA PPLVYLCAAS SPPFGVYEVE VANALAGGRL TGTDSLLDGV
VLPLPVEVVL LGEFIAGRRA KEGPFVDILG TYDIVREEPV FRVESILTRQ DPLFYSILPS
GLEHILLMGF PREAAIWSVA SRTATGVRKV RLTPGGGGWL HAVISMEKTT EGDPKNVILA
AFAAHPSLKT VVVVDADVDP DDPLDVEWAL ATRMQPDEDI VIIKGARGSS LDPSADQVTL
QTSKLGIDAT RPLSKDKSLF EKARIPFTEH
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