| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0384 |
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| Symbol | |
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| ID | 4602152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 347956 |
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| End bp | 348951 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639773145 |
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| Product | translation initiation factor IF-2B subunit delta |
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| Protein accession | YP_919796 |
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| Protein GI | 119719301 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1184] Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family |
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| TIGRFAM ID | [TIGR00511] ribose-1,5-bisphosphate isomerase, e2b2 family
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.111584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAG GCGTGGTTCG AGCTTTTCCT CCAGAGGTCT TGGAGATAGC GAGAAAGATC
AGAGACATGG AGATCAGGGG GGCTGGGCGC ATAGCTAAAG CAGCGGCAGA AGCGCTTAGG
ATCGCTGCAC TGAAGTACGA GGGGGAAAGT TGCGAAGAGT TCAAAGAGTA CATGTTGAAG
GTCGCGGAGC TGCTCGTATC GACCAGGCCC ACGGCTGTTT CTCTGCCTAA CGCTGTTAAC
TACGTGGTTT CCCAGCTGAA AAAGCCGGGT ATAGACTCCT TGGAGAAGGC CAGGTCTCTC
GTAGTGAGCA GGGCGTCACG GTTTATCGAG TACGCTGACC AAGCCTTGTC GAAGATATCG
GAGTTCGGCG AAAAGGTGAT CAGGGATGGT GACACAATTT TAACGCACTG TAACAGTGCG
GCGGCAACGG GGATACTGGT ACTGGCCCAC AAAAAGGGTA AGGACATAAC CGTGTACGCA
ACTGAAACTC GGCCAAAGTT CCAAGGCTAC ATAACGGCTG AGAGCCTTTT AAGGGAAGGA
GTGAGGGTGA GGATAATACC GGAATCCGCC GTGAGAAGCA TAATGAAGAG GATTGACAAG
GTAGTAGTCG GCGCCGACAC CGTGGCGGCT AATGGCGCGG TGGTGAACAA GGTCGGCACA
AGCCTTATCG CTCTGGCAGC CCGGGAGCGT GGTATCGACT TCTTCGTGGC GACCGAGACC
TTCAAGTTCA GCCCTTTTAC CCTGATAGGC GACATCGTAC CGATAGAGTT CAGGGCGGAA
ACCGAGATCG TAGACGAGGA AATGCTGGCA CGGCACCCCA AGCTTCGCGT GCTGAACCCA
GCATTCGACG TTACACCGCC AGACTTCATA ACGGGGATAA TAACGGAGAT AGGCATAATC
CCTCCGCAGG CAGCCTCGAT AGTAATAGAG GAAATGTACG GGCACCCAGT AATGCACGAA
TCATTAAAAG CTGTCGAGGA AGACTTTGCA CAGTAG
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| Protein sequence | MSQGVVRAFP PEVLEIARKI RDMEIRGAGR IAKAAAEALR IAALKYEGES CEEFKEYMLK
VAELLVSTRP TAVSLPNAVN YVVSQLKKPG IDSLEKARSL VVSRASRFIE YADQALSKIS
EFGEKVIRDG DTILTHCNSA AATGILVLAH KKGKDITVYA TETRPKFQGY ITAESLLREG
VRVRIIPESA VRSIMKRIDK VVVGADTVAA NGAVVNKVGT SLIALAARER GIDFFVATET
FKFSPFTLIG DIVPIEFRAE TEIVDEEMLA RHPKLRVLNP AFDVTPPDFI TGIITEIGII
PPQAASIVIE EMYGHPVMHE SLKAVEEDFA Q
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